PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
Reset
Gene Pathway Family Confidence Status Best Target
Rcrescaffold100690000490 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold103550002690 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold126180015980 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1379820049640 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1383490059100 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1385010077780 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Rcrescaffold1385620086030 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold1385660087050 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1385760088280 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1386280092470 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold1386430094230 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1386780097180 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1387470104260 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold1388640111450 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1389000114140 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1389000114150 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1391450138400 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1391500139510 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold1391560142450 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold1394460164050 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1394560164620 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold1395250169230 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Rcrescaffold1396090174460 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold1396090174470 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold140590174920 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold166950186230 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold189490197030 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Rcrescaffold2190207740 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold32600237930 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Rcrescaffold37950249020 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Rcrescaffold428420256320 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Rcrescaffold558540271110 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold5770274210 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold7480295750 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Rcrescaffold79750300160 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH