PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Rcrescaffold103730002990 Alkaloid SLS medium borderline
Rcrescaffold1351010032350 Alkaloid SLS medium borderline
Rcrescaffold1351010032370 Alkaloid SLS medium borderline
Rcrescaffold1351010032380 Alkaloid SLS medium borderline
Rcrescaffold1351010032400 Alkaloid SLS medium borderline
Rcrescaffold1351880033070 Alkaloid SLS medium borderline
Rcrescaffold1357560036300 Alkaloid SLS low borderline
Rcrescaffold1379820049570 Alkaloid SLS medium borderline
Rcrescaffold1382620052650 Alkaloid SLS medium borderline
Rcrescaffold1385440083840 Alkaloid SLS medium borderline
Rcrescaffold1386720096480 Alkaloid SLS medium pass
Rcrescaffold1386720096490 Alkaloid SLS medium borderline
Rcrescaffold1387400103730 Alkaloid SLS medium borderline
Rcrescaffold1392040148550 Alkaloid SLS low borderline
Rcrescaffold1392360151180 Alkaloid SLS medium borderline
Rcrescaffold1394340162910 Alkaloid SLS medium borderline
Rcrescaffold1394460164010 Alkaloid SLS medium borderline
Rcrescaffold1394970167490 Alkaloid SLS medium borderline
Rcrescaffold22710210640 Alkaloid SLS medium borderline
Rcrescaffold28030226190 Alkaloid SLS medium borderline
Rcrescaffold351420241600 Alkaloid SLS medium borderline
Rcrescaffold35180241710 Alkaloid SLS medium borderline
Rcrescaffold36770246650 Alkaloid SLS medium borderline
Rcrescaffold43160256570 Alkaloid SLS low borderline
Rcrescaffold5230267290 Alkaloid SLS medium borderline
Rcrescaffold68020289860 Alkaloid SLS medium borderline
Rcrescaffold69080291750 Alkaloid SLS medium borderline
Rcrescaffold9440311910 Alkaloid SLS medium borderline