PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Rcrescaffold103330002250 Alkaloid PYKS low borderline
Rcrescaffold106430005120 Alkaloid PYKS low borderline
Rcrescaffold107680005460 Alkaloid PYKS low borderline
Rcrescaffold1349210031750 Alkaloid PYKS low borderline
Rcrescaffold1365760041860 Alkaloid PYKS low borderline
Rcrescaffold1378580048650 Alkaloid PYKS low borderline
Rcrescaffold1383730059760 Alkaloid PYKS low borderline
Rcrescaffold1384860074310 Alkaloid PYKS high pass
Rcrescaffold1385260081710 Alkaloid PYKS low borderline
Rcrescaffold138550084360 Alkaloid PYKS low borderline
Rcrescaffold1386280093030 Alkaloid PYKS low borderline
Rcrescaffold1387270101410 Alkaloid PYKS low borderline
Rcrescaffold1388690111700 Alkaloid PYKS high pass
Rcrescaffold1389000114130 Alkaloid PYKS low borderline
Rcrescaffold1391700144740 Alkaloid PYKS high pass
Rcrescaffold1394050160530 Alkaloid PYKS low borderline
Rcrescaffold1395220169140 Alkaloid PYKS low borderline
Rcrescaffold1396060174260 Alkaloid PYKS low borderline
Rcrescaffold140590175000 Alkaloid PYKS low borderline
Rcrescaffold14450177730 Alkaloid PYKS low borderline
Rcrescaffold159400182540 Alkaloid PYKS low borderline
Rcrescaffold1720187820 Alkaloid PYKS low borderline
Rcrescaffold182890194170 Alkaloid PYKS low borderline
Rcrescaffold198500199320 Alkaloid PYKS low borderline
Rcrescaffold200770200180 Alkaloid PYKS low borderline
Rcrescaffold2190208160 Alkaloid PYKS low borderline
Rcrescaffold33300239380 Alkaloid PYKS low borderline
Rcrescaffold36840247260 Alkaloid PYKS low borderline
Rcrescaffold43780257930 Alkaloid PYKS low borderline
Rcrescaffold45350259100 Alkaloid PYKS high pass
Rcrescaffold46230261050 Alkaloid PYKS medium pass
Rcrescaffold592540276570 Alkaloid PYKS low borderline
Rcrescaffold79750300460 Alkaloid PYKS high pass