PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Rcrescaffold103730002980 Flavonoid UFGT medium pass
Rcrescaffold105130003450 Flavonoid UFGT low borderline
Rcrescaffold126160015860 Flavonoid UFGT medium pass
Rcrescaffold127490017800 Flavonoid UFGT high pass
Rcrescaffold127490017810 Flavonoid UFGT medium pass
Rcrescaffold1284300019050 Flavonoid UFGT medium pass
Rcrescaffold1284300019070 Flavonoid UFGT medium pass
Rcrescaffold131420024580 Flavonoid UFGT medium pass
Rcrescaffold1327640026210 Flavonoid UFGT medium pass
Rcrescaffold1353160033430 Flavonoid UFGT low borderline
Rcrescaffold1367560042590 Flavonoid UFGT medium pass
Rcrescaffold1371700043790 Flavonoid UFGT medium pass
Rcrescaffold1372220043910 Flavonoid UFGT medium pass
Rcrescaffold1372220044000 Flavonoid UFGT medium pass
Rcrescaffold1372960044880 Flavonoid UFGT medium pass
Rcrescaffold1379520049030 Flavonoid UFGT high pass
Rcrescaffold1383510059140 Flavonoid UFGT medium pass
Rcrescaffold1384440066790 Flavonoid UFGT medium pass
Rcrescaffold1384490067380 Flavonoid UFGT high pass
Rcrescaffold1384490067410 Flavonoid UFGT high pass
Rcrescaffold1384550068050 Flavonoid UFGT medium pass
Rcrescaffold1384550068060 Flavonoid UFGT high pass
Rcrescaffold1384550068160 Flavonoid UFGT medium pass
Rcrescaffold1385260081060 Flavonoid UFGT medium pass
Rcrescaffold1386730096580 Flavonoid UFGT medium pass
Rcrescaffold1387130099700 Flavonoid UFGT high pass
Rcrescaffold1387130099890 Flavonoid UFGT high pass
Rcrescaffold1387130099900 Flavonoid UFGT medium pass
Rcrescaffold1387400103630 Flavonoid UFGT medium pass
Rcrescaffold1388000107620 Flavonoid UFGT low borderline
Rcrescaffold1388900113270 Flavonoid UFGT medium pass
Rcrescaffold1389130115220 Flavonoid UFGT medium pass
Rcrescaffold1389780116840 Flavonoid UFGT high pass
Rcrescaffold1390040120470 Flavonoid UFGT low borderline
Rcrescaffold1390310123910 Flavonoid UFGT medium pass
Rcrescaffold1390950131910 Flavonoid UFGT medium pass
Rcrescaffold1391350137310 Flavonoid UFGT high pass
Rcrescaffold1391560142300 Flavonoid UFGT medium pass
Rcrescaffold1391560142650 Flavonoid UFGT medium pass
Rcrescaffold1391850146730 Flavonoid UFGT high pass
Rcrescaffold1393070154240 Flavonoid UFGT low borderline
Rcrescaffold1393580155940 Flavonoid UFGT medium pass
Rcrescaffold1394560164570 Flavonoid UFGT medium pass
Rcrescaffold141230175610 Flavonoid UFGT medium pass
Rcrescaffold182890194370 Flavonoid UFGT medium pass
Rcrescaffold187330195740 Flavonoid UFGT high pass
Rcrescaffold18840196530 Flavonoid UFGT low borderline
Rcrescaffold19170197310 Flavonoid UFGT medium pass
Rcrescaffold200770200170 Flavonoid UFGT medium pass
Rcrescaffold208720201890 Flavonoid UFGT medium pass