PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold105510003600 Phenylpropanoid 4CL medium pass
Rcrescaffold12820018630 Phenylpropanoid 4CL medium pass
Rcrescaffold1357560036640 Phenylpropanoid 4CL medium pass
Rcrescaffold1374450045570 Phenylpropanoid 4CL medium pass
Rcrescaffold1376590047880 Phenylpropanoid 4CL medium pass
Rcrescaffold1381580050220 Phenylpropanoid 4CL medium pass
Rcrescaffold1382500052010 Phenylpropanoid 4CL low borderline
Rcrescaffold1382870055670 Phenylpropanoid 4CL low borderline
Rcrescaffold1382970056380 Phenylpropanoid 4CL medium pass
Rcrescaffold1383800060750 Phenylpropanoid 4CL medium pass
Rcrescaffold1384440066810 Phenylpropanoid 4CL medium pass
Rcrescaffold1384470067120 Phenylpropanoid 4CL medium pass
Rcrescaffold1384490067300 Phenylpropanoid 4CL medium pass
Rcrescaffold1384560068170 Phenylpropanoid 4CL medium pass
Rcrescaffold1384560068180 Phenylpropanoid 4CL medium pass
Rcrescaffold1384580069230 Phenylpropanoid 4CL medium pass
Rcrescaffold1384860074220 Phenylpropanoid 4CL low borderline
Rcrescaffold1385010077680 Phenylpropanoid 4CL medium pass
Rcrescaffold1385130079720 Phenylpropanoid 4CL low borderline
Rcrescaffold1390080121040 Phenylpropanoid 4CL medium pass
Rcrescaffold1391560142690 Phenylpropanoid 4CL medium pass
Rcrescaffold1391910147840 Phenylpropanoid 4CL low borderline
Rcrescaffold1391970148170 Phenylpropanoid 4CL low borderline
Rcrescaffold1393500155400 Phenylpropanoid 4CL medium pass
Rcrescaffold1393840157920 Phenylpropanoid 4CL medium pass
Rcrescaffold1393890158470 Phenylpropanoid 4CL low borderline
Rcrescaffold1393930158950 Phenylpropanoid 4CL low borderline
Rcrescaffold178340191880 Phenylpropanoid 4CL low borderline
Rcrescaffold193080197820 Phenylpropanoid 4CL low borderline
Rcrescaffold22710210830 Phenylpropanoid 4CL low borderline
Rcrescaffold237320214820 Phenylpropanoid 4CL medium pass
Rcrescaffold31430235450 Phenylpropanoid 4CL medium pass
Rcrescaffold37450248270 Phenylpropanoid 4CL low borderline
Rcrescaffold40730253680 Phenylpropanoid 4CL low borderline
Rcrescaffold495320263690 Phenylpropanoid 4CL medium pass
Rcrescaffold49720264680 Phenylpropanoid 4CL medium pass
Rcrescaffold534870268580 Phenylpropanoid 4CL medium pass
Rcrescaffold5900275810 Phenylpropanoid 4CL low borderline
Rcrescaffold59620278370 Phenylpropanoid 4CL medium pass
Rcrescaffold60920279570 Phenylpropanoid 4CL low borderline
Rcrescaffold70440293200 Phenylpropanoid 4CL medium pass
Rcrescaffold84480305140 Phenylpropanoid 4CL medium pass
Rcrescaffold85450306530 Phenylpropanoid 4CL medium pass
Rcrescaffold10230001960 Phenylpropanoid C3'H/CYP98A medium borderline
Rcrescaffold103730002990 Phenylpropanoid C3'H/CYP98A low borderline
Rcrescaffold112460007420 Phenylpropanoid C3'H/CYP98A medium borderline
Rcrescaffold11320008220 Phenylpropanoid C3'H/CYP98A medium borderline
Rcrescaffold126070015570 Phenylpropanoid C3'H/CYP98A low borderline
Rcrescaffold126180016130 Phenylpropanoid C3'H/CYP98A low borderline
Rcrescaffold128720019480 Phenylpropanoid C3'H/CYP98A high pass