PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Rcrescaffold107680005490 Flavonoid F3H medium borderline
Rcrescaffold107680005500 Flavonoid F3H medium pass
Rcrescaffold112360007210 Flavonoid F3H medium borderline
Rcrescaffold112460007470 Flavonoid F3H low borderline
Rcrescaffold11270008060 Flavonoid F3H medium borderline
Rcrescaffold121390013670 Flavonoid F3H medium borderline
Rcrescaffold1294720020640 Flavonoid F3H medium borderline
Rcrescaffold1295160020720 Flavonoid F3H medium borderline
Rcrescaffold1358800038070 Flavonoid F3H medium borderline
Rcrescaffold1372610044760 Flavonoid F3H medium borderline
Rcrescaffold1378560048630 Flavonoid F3H low borderline
Rcrescaffold1379820049590 Flavonoid F3H medium pass
Rcrescaffold1381770050890 Flavonoid F3H low borderline
Rcrescaffold1381770050930 Flavonoid F3H medium borderline
Rcrescaffold1383280058310 Flavonoid F3H medium borderline
Rcrescaffold1384300063720 Flavonoid F3H low borderline
Rcrescaffold1384450066910 Flavonoid F3H low borderline
Rcrescaffold1385270082070 Flavonoid F3H medium borderline
Rcrescaffold1385810088880 Flavonoid F3H medium borderline
Rcrescaffold1386450094360 Flavonoid F3H medium borderline
Rcrescaffold1386640095690 Flavonoid F3H medium borderline
Rcrescaffold1387140100120 Flavonoid F3H low borderline
Rcrescaffold1388570110990 Flavonoid F3H medium borderline
Rcrescaffold1388590111020 Flavonoid F3H medium borderline
Rcrescaffold1388640111270 Flavonoid F3H medium borderline
Rcrescaffold1389890118530 Flavonoid F3H low borderline
Rcrescaffold1389980120000 Flavonoid F3H low borderline
Rcrescaffold1390310123840 Flavonoid F3H medium borderline
Rcrescaffold1390570126040 Flavonoid F3H medium borderline
Rcrescaffold1390570126830 Flavonoid F3H low borderline
Rcrescaffold1390790129700 Flavonoid F3H medium borderline
Rcrescaffold1390790129710 Flavonoid F3H medium pass
Rcrescaffold1391240135900 Flavonoid F3H medium borderline
Rcrescaffold1391330137160 Flavonoid F3H medium borderline
Rcrescaffold1391630144010 Flavonoid F3H medium borderline
Rcrescaffold1392710152870 Flavonoid F3H low borderline
Rcrescaffold1392960153320 Flavonoid F3H medium borderline
Rcrescaffold1393910158770 Flavonoid F3H low borderline
Rcrescaffold1394030160020 Flavonoid F3H medium borderline
Rcrescaffold1394050160470 Flavonoid F3H medium borderline
Rcrescaffold1394700166290 Flavonoid F3H medium pass
Rcrescaffold1394970167720 Flavonoid F3H medium borderline
Rcrescaffold1395500171510 Flavonoid F3H medium borderline
Rcrescaffold1396060174310 Flavonoid F3H low borderline
Rcrescaffold1396060174320 Flavonoid F3H low borderline
Rcrescaffold14350176960 Flavonoid F3H medium borderline
Rcrescaffold149260179850 Flavonoid F3H medium borderline
Rcrescaffold159400183240 Flavonoid F3H medium borderline
Rcrescaffold170220186980 Flavonoid F3H medium borderline
Rcrescaffold18080192590 Flavonoid F3H medium pass