PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
XP_023874158.1 Alkaloid 16OMT medium pass
XP_023874347.1 Alkaloid 16OMT medium borderline
XP_023875828.1 Alkaloid 16OMT medium borderline
XP_023876734.1 Alkaloid 16OMT medium borderline
XP_023876735.1 Alkaloid 16OMT medium borderline
XP_023876736.1 Alkaloid 16OMT medium borderline
XP_023876739.1 Alkaloid 16OMT medium borderline
XP_023880458.1 Alkaloid 16OMT medium borderline
XP_023885967.1 Alkaloid 16OMT medium borderline
XP_023886424.1 Alkaloid 16OMT medium borderline
XP_023886443.1 Alkaloid 16OMT medium borderline
XP_023886452.1 Alkaloid 16OMT medium borderline
XP_023886473.1 Alkaloid 16OMT medium borderline
XP_023887630.1 Alkaloid 16OMT medium borderline
XP_023888713.1 Alkaloid 16OMT medium borderline
XP_023888735.1 Alkaloid 16OMT medium pass
XP_023888736.1 Alkaloid 16OMT medium borderline
XP_023888740.1 Alkaloid 16OMT medium borderline
XP_023888744.1 Alkaloid 16OMT medium borderline
XP_023891076.1 Alkaloid 16OMT medium borderline
XP_023891088.1 Alkaloid 16OMT medium borderline
XP_023891964.1 Alkaloid 16OMT medium borderline
XP_023896636.1 Alkaloid 16OMT medium borderline
XP_023896816.1 Alkaloid 16OMT medium borderline
XP_023896865.1 Alkaloid 16OMT medium borderline
XP_023903544.1 Alkaloid 16OMT medium borderline
XP_023904855.1 Alkaloid 16OMT low borderline
XP_023907018.1 Alkaloid 16OMT medium borderline
XP_023907026.1 Alkaloid 16OMT medium borderline
XP_023907033.1 Alkaloid 16OMT medium borderline
XP_023907042.1 Alkaloid 16OMT medium borderline
XP_023907050.1 Alkaloid 16OMT medium borderline
XP_023907057.1 Alkaloid 16OMT medium borderline
XP_023907065.1 Alkaloid 16OMT medium borderline
XP_023910052.1 Alkaloid 16OMT medium borderline
XP_023910626.1 Alkaloid 16OMT medium borderline
XP_023911346.1 Alkaloid 16OMT medium borderline
XP_023913111.1 Alkaloid 16OMT medium borderline
XP_023918348.1 Alkaloid 16OMT medium borderline
XP_023919591.1 Alkaloid 16OMT medium borderline
XP_023919596.1 Alkaloid 16OMT medium borderline
XP_023919597.1 Alkaloid 16OMT medium borderline
XP_023922951.1 Alkaloid 16OMT medium borderline
XP_023922952.1 Alkaloid 16OMT medium borderline
XP_023925732.1 Alkaloid 16OMT medium borderline
XP_023927940.1 Alkaloid 16OMT medium borderline
XP_023875522.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_023878745.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_023881503.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_023888453.1 Alkaloid 6OMT_4OMT_SOMT medium pass