PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
XP_023871750.1 Alkaloid T16H medium borderline
XP_023876627.1 Alkaloid T16H medium borderline
XP_023876903.1 Alkaloid T16H medium borderline
XP_023877984.1 Alkaloid T16H medium borderline
XP_023878409.1 Alkaloid T16H medium borderline
XP_023878785.1 Alkaloid T16H low borderline
XP_023879127.1 Alkaloid T16H medium borderline
XP_023879904.1 Alkaloid T16H medium borderline
XP_023883849.1 Alkaloid T16H medium borderline
XP_023886322.1 Alkaloid T16H medium borderline
XP_023886344.1 Alkaloid T16H medium borderline
XP_023887832.1 Alkaloid T16H medium borderline
XP_023889106.1 Alkaloid T16H medium borderline
XP_023890740.1 Alkaloid T16H medium borderline
XP_023892033.1 Alkaloid T16H medium borderline
XP_023892738.1 Alkaloid T16H low borderline
XP_023893131.1 Alkaloid T16H medium borderline
XP_023893283.1 Alkaloid T16H medium borderline
XP_023895455.1 Alkaloid T16H medium borderline
XP_023897885.1 Alkaloid T16H medium borderline
XP_023898170.1 Alkaloid T16H medium borderline
XP_023899817.1 Alkaloid T16H low borderline
XP_023900191.1 Alkaloid T16H medium borderline
XP_023900506.1 Alkaloid T16H low borderline
XP_023900588.1 Alkaloid T16H medium borderline
XP_023903170.1 Alkaloid T16H medium borderline
XP_023903171.1 Alkaloid T16H medium borderline
XP_023903393.1 Alkaloid T16H medium borderline
XP_023906533.1 Alkaloid T16H medium borderline
XP_023908530.1 Alkaloid T16H medium borderline
XP_023909133.1 Alkaloid T16H medium borderline
XP_023911947.1 Alkaloid T16H medium pass
XP_023911948.1 Alkaloid T16H medium pass
XP_023913398.1 Alkaloid T16H medium borderline
XP_023913400.1 Alkaloid T16H medium borderline
XP_023914289.1 Alkaloid T16H medium borderline
XP_023916323.1 Alkaloid T16H medium borderline
XP_023916714.1 Alkaloid T16H medium borderline
XP_023916715.1 Alkaloid T16H medium borderline
XP_023917437.1 Alkaloid T16H medium borderline
XP_023920392.1 Alkaloid T16H medium borderline
XP_023924452.1 Alkaloid T16H medium borderline
XP_023925268.1 Alkaloid T16H medium borderline
XP_023925487.1 Alkaloid T16H medium borderline
XP_023927310.1 Alkaloid T16H medium borderline
XP_023927324.1 Alkaloid T16H medium borderline