PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP719
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Gene Pathway Family Confidence Status Best Target
XP_023878360.1 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
XP_023880446.1 Alkaloid CYP719 medium borderline CYP719__00003__sp_B1NF19_C719D_ARGME
XP_023880537.1 Alkaloid CYP719 medium borderline CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI
XP_023881632.1 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME
XP_023884594.1 Alkaloid CYP719 medium borderline CYP719__00008__sp_L7T8H2_C719A_SINHE
XP_023889152.1 Alkaloid CYP719 medium borderline CYP719__00002__sp_B1NF18_C719B_PAPSO
XP_023892259.1 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME
XP_023894277.1 Alkaloid CYP719 medium borderline CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI
XP_023895248.1 Alkaloid CYP719 medium borderline CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI
XP_023895259.1 Alkaloid CYP719 medium borderline CYP719__00001__sp_A0A7T9QPT0_C719A_PIPNI
XP_023896021.1 Alkaloid CYP719 medium borderline CYP719__00010__sp_Q50LH4_C7193_ESCCA
XP_023902565.1 Alkaloid CYP719 medium borderline CYP719__00007__sp_L7T720_C719A_PODPE
XP_023914143.1 Alkaloid CYP719 medium borderline CYP719__00008__sp_L7T8H2_C719A_SINHE
XP_023921303.1 Alkaloid CYP719 medium borderline CYP719__00010__sp_Q50LH4_C7193_ESCCA
XP_023921304.1 Alkaloid CYP719 medium borderline CYP719__00010__sp_Q50LH4_C7193_ESCCA
XP_023923757.1 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
XP_023925599.1 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME
XP_023925600.1 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME
XP_023927931.1 Alkaloid CYP719 medium borderline CYP719__00008__sp_L7T8H2_C719A_SINHE
XP_023928192.1 Alkaloid CYP719 medium borderline CYP719__00004__sp_B1NF20_C719E_ARGME
XP_023928616.1 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
XP_023929085.1 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA
XP_023929086.1 Alkaloid CYP719 medium borderline CYP719__00005__sp_B5UAQ8_C7195_ESCCA