PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
XP_023877596.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_023879066.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023885197.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023885213.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023888623.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023891525.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023898585.1 Alkaloid COR low borderline COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_023902920.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023910349.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023912504.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023912511.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023912512.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023912513.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023912514.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023912519.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023912520.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023912521.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023912524.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_023912552.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
XP_023915974.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023917722.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023918886.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023918892.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023919280.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
XP_023922371.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023923896.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
XP_023927927.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
XP_023928571.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO