PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
XP_023873220.1 Steroid ROT3/CYP90C1 medium borderline
XP_023883656.1 Steroid ROT3/CYP90C1 medium borderline
XP_023884529.1 Steroid ROT3/CYP90C1 low borderline
XP_023884530.1 Steroid ROT3/CYP90C1 low borderline
XP_023884531.1 Steroid ROT3/CYP90C1 low borderline
XP_023886170.1 Steroid ROT3/CYP90C1 medium borderline
XP_023887411.1 Steroid ROT3/CYP90C1 medium borderline
XP_023888813.1 Steroid ROT3/CYP90C1 medium borderline
XP_023888814.1 Steroid ROT3/CYP90C1 medium borderline
XP_023891289.1 Steroid ROT3/CYP90C1 medium borderline
XP_023896955.1 Steroid ROT3/CYP90C1 low borderline
XP_023899495.1 Steroid ROT3/CYP90C1 low borderline
XP_023906758.1 Steroid ROT3/CYP90C1 medium borderline
XP_023906874.1 Steroid ROT3/CYP90C1 medium borderline
XP_023910599.1 Steroid ROT3/CYP90C1 medium borderline
XP_023922665.1 Steroid ROT3/CYP90C1 medium borderline
XP_023922826.1 Steroid ROT3/CYP90C1 medium borderline
XP_023923745.1 Steroid ROT3/CYP90C1 medium pass
XP_023926620.1 Steroid ROT3/CYP90C1 medium borderline