PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
XP_023870577.1 Alkaloid IO medium borderline
XP_023871073.1 Alkaloid IO medium borderline
XP_023871431.1 Alkaloid IO medium borderline
XP_023872416.1 Alkaloid IO medium borderline
XP_023874008.1 Alkaloid IO medium borderline
XP_023877469.1 Alkaloid IO medium borderline
XP_023877526.1 Alkaloid IO low borderline
XP_023877902.1 Alkaloid IO low borderline
XP_023880843.1 Alkaloid IO low borderline
XP_023881150.1 Alkaloid IO low borderline
XP_023881556.1 Alkaloid IO low borderline
XP_023885692.1 Alkaloid IO low borderline
XP_023885907.1 Alkaloid IO medium borderline
XP_023888006.1 Alkaloid IO medium borderline
XP_023888011.1 Alkaloid IO medium borderline
XP_023888461.1 Alkaloid IO low borderline
XP_023889404.1 Alkaloid IO medium borderline
XP_023892867.1 Alkaloid IO medium borderline
XP_023892898.1 Alkaloid IO medium borderline
XP_023894247.1 Alkaloid IO medium borderline
XP_023895142.1 Alkaloid IO medium borderline
XP_023898468.1 Alkaloid IO medium borderline
XP_023899317.1 Alkaloid IO medium borderline
XP_023901673.1 Alkaloid IO low borderline
XP_023902510.1 Alkaloid IO medium borderline
XP_023902730.1 Alkaloid IO medium borderline
XP_023903810.1 Alkaloid IO medium borderline
XP_023905477.1 Alkaloid IO medium borderline
XP_023905481.1 Alkaloid IO medium borderline
XP_023908470.1 Alkaloid IO medium borderline
XP_023908799.1 Alkaloid IO low borderline
XP_023909939.1 Alkaloid IO medium borderline
XP_023910352.1 Alkaloid IO low borderline
XP_023913568.1 Alkaloid IO medium borderline
XP_023915509.1 Alkaloid IO low borderline
XP_023917639.1 Alkaloid IO low borderline
XP_023920374.1 Alkaloid IO medium borderline
XP_023922328.1 Alkaloid IO low borderline
XP_023922830.1 Alkaloid IO low borderline
XP_023922931.1 Alkaloid IO medium borderline
XP_023922949.1 Alkaloid IO medium borderline
XP_023925378.1 Alkaloid IO low borderline
XP_023927272.1 Alkaloid IO medium borderline
XP_023927429.1 Alkaloid IO medium borderline
XP_023928225.1 Alkaloid IO medium borderline