PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
Reset
Gene Pathway Family Confidence Status
XP_023871328.1 Flavonoid FNS low borderline
XP_023871431.1 Flavonoid FNS low borderline
XP_023872416.1 Flavonoid FNS medium borderline
XP_023873220.1 Flavonoid FNS medium borderline
XP_023873590.1 Flavonoid FNS medium borderline
XP_023875634.1 Flavonoid FNS medium borderline
XP_023877236.1 Flavonoid FNS low borderline
XP_023877237.1 Flavonoid FNS low borderline
XP_023878409.1 Flavonoid FNS medium borderline
XP_023880836.1 Flavonoid FNS medium borderline
XP_023880839.1 Flavonoid FNS medium borderline
XP_023880842.1 Flavonoid FNS low borderline
XP_023881328.1 Flavonoid FNS medium borderline
XP_023881632.1 Flavonoid FNS low borderline
XP_023888813.1 Flavonoid FNS medium borderline
XP_023888814.1 Flavonoid FNS medium borderline
XP_023888815.1 Flavonoid FNS medium borderline
XP_023889152.1 Flavonoid FNS low borderline
XP_023891511.1 Flavonoid FNS low borderline
XP_023891512.1 Flavonoid FNS low borderline
XP_023892174.1 Flavonoid FNS medium borderline
XP_023892362.1 Flavonoid FNS low borderline
XP_023892758.1 Flavonoid FNS medium borderline
XP_023892759.1 Flavonoid FNS medium borderline
XP_023893131.1 Flavonoid FNS medium borderline
XP_023894941.1 Flavonoid FNS medium borderline
XP_023895443.1 Flavonoid FNS medium borderline
XP_023898240.1 Flavonoid FNS medium borderline
XP_023899817.1 Flavonoid FNS medium borderline
XP_023902730.1 Flavonoid FNS medium borderline
XP_023903393.1 Flavonoid FNS medium borderline
XP_023903810.1 Flavonoid FNS medium borderline
XP_023904289.1 Flavonoid FNS low borderline
XP_023904290.1 Flavonoid FNS low borderline
XP_023906533.1 Flavonoid FNS medium borderline
XP_023906758.1 Flavonoid FNS medium borderline
XP_023907001.1 Flavonoid FNS low borderline
XP_023907254.1 Flavonoid FNS medium borderline
XP_023909387.1 Flavonoid FNS medium borderline
XP_023909874.1 Flavonoid FNS low borderline
XP_023910008.1 Flavonoid FNS medium borderline
XP_023910599.1 Flavonoid FNS medium borderline
XP_023912607.1 Flavonoid FNS medium borderline
XP_023912818.1 Flavonoid FNS medium borderline
XP_023913900.1 Flavonoid FNS medium borderline
XP_023914289.1 Flavonoid FNS medium borderline
XP_023914756.1 Flavonoid FNS medium borderline
XP_023916187.1 Flavonoid FNS medium borderline
XP_023920296.1 Flavonoid FNS low borderline
XP_023920297.1 Flavonoid FNS low borderline