PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
XP_023871224.1 Alkaloid BBE low borderline
XP_023871602.1 Alkaloid BBE medium borderline
XP_023871603.1 Alkaloid BBE medium borderline
XP_023871604.1 Alkaloid BBE medium borderline
XP_023871606.1 Alkaloid BBE medium borderline
XP_023871611.1 Alkaloid BBE medium borderline
XP_023871612.1 Alkaloid BBE medium borderline
XP_023871622.1 Alkaloid BBE medium borderline
XP_023871632.1 Alkaloid BBE medium borderline
XP_023871639.1 Alkaloid BBE medium borderline
XP_023874564.1 Alkaloid BBE medium borderline
XP_023877345.1 Alkaloid BBE low borderline
XP_023880827.1 Alkaloid BBE low borderline
XP_023881232.1 Alkaloid BBE medium borderline
XP_023881657.1 Alkaloid BBE medium borderline
XP_023893362.1 Alkaloid BBE medium borderline
XP_023898316.1 Alkaloid BBE low borderline
XP_023900852.1 Alkaloid BBE medium borderline
XP_023903462.1 Alkaloid BBE low borderline
XP_023913785.1 Alkaloid BBE medium borderline
XP_023913786.1 Alkaloid BBE medium borderline
XP_023913821.1 Alkaloid BBE medium borderline
XP_023913830.1 Alkaloid BBE medium borderline
XP_023918376.1 Alkaloid BBE low borderline
XP_023920419.1 Alkaloid BBE medium borderline
XP_023922491.1 Alkaloid BBE medium borderline
XP_023923628.1 Alkaloid BBE medium borderline
XP_023924161.1 Alkaloid BBE medium borderline
XP_023925395.1 Alkaloid BBE low borderline
XP_023927497.1 Alkaloid BBE medium borderline