PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CNMT
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Gene Pathway Family Confidence Status
XP_023871047.1 Alkaloid CNMT low borderline
XP_023877943.1 Alkaloid CNMT medium pass
XP_023879214.1 Alkaloid CNMT medium borderline
XP_023879216.1 Alkaloid CNMT medium borderline
XP_023879709.1 Alkaloid CNMT low borderline
XP_023880432.1 Alkaloid CNMT medium pass
XP_023881114.1 Alkaloid CNMT low borderline
XP_023883173.1 Alkaloid CNMT medium pass
XP_023887941.1 Alkaloid CNMT low borderline
XP_023888269.1 Alkaloid CNMT medium pass
XP_023888281.1 Alkaloid CNMT medium pass
XP_023889216.1 Alkaloid CNMT medium borderline
XP_023890629.1 Alkaloid CNMT low borderline
XP_023893599.1 Alkaloid CNMT low borderline
XP_023894395.1 Alkaloid CNMT low borderline
XP_023894396.1 Alkaloid CNMT low borderline
XP_023894397.1 Alkaloid CNMT low borderline
XP_023896003.1 Alkaloid CNMT low borderline
XP_023897123.1 Alkaloid CNMT low borderline
XP_023899130.1 Alkaloid CNMT low borderline
XP_023899579.1 Alkaloid CNMT low borderline
XP_023901533.1 Alkaloid CNMT low borderline
XP_023902218.1 Alkaloid CNMT low borderline
XP_023902717.1 Alkaloid CNMT low borderline
XP_023903063.1 Alkaloid CNMT low borderline
XP_023908222.1 Alkaloid CNMT medium borderline
XP_023909751.1 Alkaloid CNMT low borderline
XP_023909940.1 Alkaloid CNMT medium pass
XP_023910439.1 Alkaloid CNMT low borderline
XP_023911530.1 Alkaloid CNMT low borderline
XP_023913882.1 Alkaloid CNMT low borderline
XP_023913883.1 Alkaloid CNMT low borderline
XP_023915859.1 Alkaloid CNMT medium pass
XP_023917472.1 Alkaloid CNMT low borderline
XP_023917481.1 Alkaloid CNMT low borderline
XP_023917488.1 Alkaloid CNMT low borderline
XP_023917496.1 Alkaloid CNMT low borderline
XP_023917504.1 Alkaloid CNMT low borderline
XP_023917555.1 Alkaloid CNMT low borderline
XP_023918373.1 Alkaloid CNMT low borderline
XP_023920382.1 Alkaloid CNMT low borderline
XP_023920866.1 Alkaloid CNMT low borderline