PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
XP_023874098.1 Alkaloid PYKS low borderline
XP_023875329.1 Alkaloid PYKS low borderline
XP_023875872.1 Alkaloid PYKS low borderline
XP_023877933.1 Alkaloid PYKS low borderline
XP_023879873.1 Alkaloid PYKS high pass
XP_023883745.1 Alkaloid PYKS high pass
XP_023887417.1 Alkaloid PYKS low borderline
XP_023888186.1 Alkaloid PYKS low borderline
XP_023888187.1 Alkaloid PYKS low borderline
XP_023888189.1 Alkaloid PYKS low borderline
XP_023888190.1 Alkaloid PYKS low borderline
XP_023888199.1 Alkaloid PYKS low borderline
XP_023888200.1 Alkaloid PYKS low borderline
XP_023888207.1 Alkaloid PYKS low borderline
XP_023888452.1 Alkaloid PYKS high pass
XP_023890070.1 Alkaloid PYKS low borderline
XP_023890071.1 Alkaloid PYKS low borderline
XP_023892712.1 Alkaloid PYKS low borderline
XP_023892722.1 Alkaloid PYKS low borderline
XP_023893540.1 Alkaloid PYKS low borderline
XP_023893718.1 Alkaloid PYKS low borderline
XP_023896431.1 Alkaloid PYKS low borderline
XP_023896520.1 Alkaloid PYKS high pass
XP_023900626.1 Alkaloid PYKS high pass
XP_023900628.1 Alkaloid PYKS high pass
XP_023901351.1 Alkaloid PYKS low borderline
XP_023908520.1 Alkaloid PYKS low borderline
XP_023908552.1 Alkaloid PYKS low borderline
XP_023908553.1 Alkaloid PYKS low borderline
XP_023908662.1 Alkaloid PYKS low borderline
XP_023912920.1 Alkaloid PYKS low borderline
XP_023913768.1 Alkaloid PYKS medium pass
XP_023914191.1 Alkaloid PYKS high pass
XP_023914495.1 Alkaloid PYKS low borderline
XP_023916004.1 Alkaloid PYKS high pass
XP_023919198.1 Alkaloid PYKS low borderline
XP_023923036.1 Alkaloid PYKS low borderline
XP_023926080.1 Alkaloid PYKS low borderline
XP_023927198.1 Alkaloid PYKS low borderline
XP_023929711.1 Alkaloid PYKS low borderline