PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
XP_023877011.1 Alkaloid PMT medium pass
XP_023877053.1 Alkaloid PMT medium pass
XP_023877057.1 Alkaloid PMT medium pass
XP_023877058.1 Alkaloid PMT medium pass
XP_023878062.1 Alkaloid PMT low borderline
XP_023878063.1 Alkaloid PMT low borderline
XP_023878064.1 Alkaloid PMT low borderline
XP_023878065.1 Alkaloid PMT low borderline
XP_023878066.1 Alkaloid PMT low borderline
XP_023878067.1 Alkaloid PMT low borderline
XP_023878068.1 Alkaloid PMT low borderline
XP_023878069.1 Alkaloid PMT low borderline
XP_023883233.1 Alkaloid PMT medium pass
XP_023888312.1 Alkaloid PMT low borderline
XP_023889680.1 Alkaloid PMT low borderline
XP_023893080.1 Alkaloid PMT medium pass
XP_023894199.1 Alkaloid PMT medium borderline
XP_023895208.1 Alkaloid PMT low borderline
XP_023896734.1 Alkaloid PMT medium pass
XP_023897225.1 Alkaloid PMT medium pass
XP_023897227.1 Alkaloid PMT low borderline
XP_023899212.1 Alkaloid PMT low borderline
XP_023900567.1 Alkaloid PMT low borderline
XP_023901768.1 Alkaloid PMT medium borderline
XP_023902119.1 Alkaloid PMT medium pass
XP_023903334.1 Alkaloid PMT medium borderline
XP_023903556.1 Alkaloid PMT low borderline
XP_023903557.1 Alkaloid PMT low borderline
XP_023903558.1 Alkaloid PMT low borderline
XP_023903559.1 Alkaloid PMT low borderline
XP_023903560.1 Alkaloid PMT low borderline
XP_023903733.1 Alkaloid PMT low borderline
XP_023908503.1 Alkaloid PMT medium borderline
XP_023913372.1 Alkaloid PMT low borderline
XP_023914414.1 Alkaloid PMT medium borderline
XP_023917526.1 Alkaloid PMT medium pass
XP_023917914.1 Alkaloid PMT medium pass
XP_023921708.1 Alkaloid PMT low borderline
XP_023921709.1 Alkaloid PMT low borderline
XP_023921955.1 Alkaloid PMT low borderline
XP_023923930.1 Alkaloid PMT low borderline
XP_023923955.1 Alkaloid PMT low borderline
XP_023924791.1 Alkaloid PMT low borderline
XP_023924872.1 Alkaloid PMT low borderline
XP_023924873.1 Alkaloid PMT low borderline
XP_023925998.1 Alkaloid PMT medium pass
XP_023927231.1 Alkaloid PMT low borderline
XP_023927234.1 Alkaloid PMT medium pass
XP_023927880.1 Alkaloid PMT low borderline
XP_023927894.1 Alkaloid PMT medium pass