PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.591 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_6_RagTag.591
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.806 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_6_RagTag.806
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.807 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_6_RagTag.807
bruguiera_sexangula_evm.model.Scaffold_6_RagTag.960 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_6_RagTag.960
bruguiera_sexangula_evm.model.Scaffold_7_RagTag.1086 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_7_RagTag.1086
bruguiera_sexangula_evm.model.Scaffold_7_RagTag.225 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_7_RagTag.225
bruguiera_sexangula_evm.model.Scaffold_8_RagTag.1099 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_8_RagTag.1099
bruguiera_sexangula_evm.model.Scaffold_8_RagTag.1514 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_8_RagTag.1514
bruguiera_sexangula_evm.model.Scaffold_9_RagTag.644 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_9_RagTag.644
Bnov1330006040 bryhnia_novae_angliae Bnov1330006040
Bnov1820015700 bryhnia_novae_angliae Bnov1820015700
Bnov1820015720 bryhnia_novae_angliae Bnov1820015720
Bnov2110019140 bryhnia_novae_angliae Bnov2110019140
Bnov2110019150 bryhnia_novae_angliae Bnov2110019150
Bnov2220021980 bryhnia_novae_angliae Bnov2220021980
Bnov3090039910 bryhnia_novae_angliae Bnov3090039910
Bnov833080084960 bryhnia_novae_angliae Bnov833080084960
Bnov840890098620 bryhnia_novae_angliae Bnov840890098620
Bnov845760116210 bryhnia_novae_angliae Bnov845760116210
Bnov845760116220 bryhnia_novae_angliae Bnov845760116220
Bnov845760116230 bryhnia_novae_angliae Bnov845760116230
Bnov849880134950 bryhnia_novae_angliae Bnov849880134950
Bnov851770145470 bryhnia_novae_angliae Bnov851770145470
Bnov853160157290 bryhnia_novae_angliae Bnov853160157290
Bnov853700161600 bryhnia_novae_angliae Bnov853700161600
Bnov855170173770 bryhnia_novae_angliae Bnov855170173770
Bnov858000199450 bryhnia_novae_angliae Bnov858000199450
Bnov858360203160 bryhnia_novae_angliae Bnov858360203160
Bnov859490214290 bryhnia_novae_angliae Bnov859490214290
Bnov860360222570 bryhnia_novae_angliae Bnov860360222570