PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Avestig00010748_pilon0235830.1 aldrovanda_vesiculosa Avestig00010748_pilon0235830.1
Avestig00010916_pilon0243310.1 aldrovanda_vesiculosa Avestig00010916_pilon0243310.1
Avestig00010926_pilon0244160.1 aldrovanda_vesiculosa Avestig00010926_pilon0244160.1
Agluscaffold10430_cov970009460 alnus_glutinosa Agluscaffold10430_cov970009460
Agluscaffold120810_cov1070033460 alnus_glutinosa Agluscaffold120810_cov1070033460
Agluscaffold12264_cov1070034860 alnus_glutinosa Agluscaffold12264_cov1070034860
Agluscaffold12267_cov1020034950 alnus_glutinosa Agluscaffold12267_cov1020034950
Agluscaffold1359_cov950053510 alnus_glutinosa Agluscaffold1359_cov950053510
Agluscaffold15381_cov1030073040 alnus_glutinosa Agluscaffold15381_cov1030073040
Agluscaffold15381_cov1030073050 alnus_glutinosa Agluscaffold15381_cov1030073050
Agluscaffold18330_cov1040101840 alnus_glutinosa Agluscaffold18330_cov1040101840
Agluscaffold19389_cov910111350 alnus_glutinosa Agluscaffold19389_cov910111350
Agluscaffold20254_cov1100120500 alnus_glutinosa Agluscaffold20254_cov1100120500
Agluscaffold2529_cov1030155120 alnus_glutinosa Agluscaffold2529_cov1030155120
Agluscaffold31454_cov990188520 alnus_glutinosa Agluscaffold31454_cov990188520
Agluscaffold3676_cov860217400 alnus_glutinosa Agluscaffold3676_cov860217400
Agluscaffold37517_cov1060220610 alnus_glutinosa Agluscaffold37517_cov1060220610
Agluscaffold424506_cov1080249070 alnus_glutinosa Agluscaffold424506_cov1080249070
Agluscaffold424581_cov960253370 alnus_glutinosa Agluscaffold424581_cov960253370
Agluscaffold488_cov900306140 alnus_glutinosa Agluscaffold488_cov900306140
Agluscaffold5101_cov1050314050 alnus_glutinosa Agluscaffold5101_cov1050314050
Agluscaffold59889_cov1040343470 alnus_glutinosa Agluscaffold59889_cov1040343470
Agluscaffold6640_cov1060363480 alnus_glutinosa Agluscaffold6640_cov1060363480
Agluscaffold66976_cov900364850 alnus_glutinosa Agluscaffold66976_cov900364850
Agluscaffold73714_cov1030380490 alnus_glutinosa Agluscaffold73714_cov1030380490
Agluscaffold751_cov1050383810 alnus_glutinosa Agluscaffold751_cov1050383810
Agluscaffold86467_cov1000408220 alnus_glutinosa Agluscaffold86467_cov1000408220
Agluscaffold8721_cov1010409790 alnus_glutinosa Agluscaffold8721_cov1010409790
Agluscaffold9006_cov940415270 alnus_glutinosa Agluscaffold9006_cov940415270
alnus_rubra_ALNRU00007040-RA alnus_rubra alnus_rubra_ALNRU00007040-RA