PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
acer_truncatum_Atru.chr12.698 acer_truncatum acer_truncatum_Atru.chr12.698
acer_truncatum_Atru.chr13.1409 acer_truncatum acer_truncatum_Atru.chr13.1409
acer_truncatum_Atru.chr13.459 acer_truncatum acer_truncatum_Atru.chr13.459
acer_truncatum_Atru.chr2.79 acer_truncatum acer_truncatum_Atru.chr2.79
acer_truncatum_Atru.chr3.3800 acer_truncatum acer_truncatum_Atru.chr3.3800
acer_truncatum_Atru.chr3.3801 acer_truncatum acer_truncatum_Atru.chr3.3801
acer_truncatum_Atru.chr4.1765 acer_truncatum acer_truncatum_Atru.chr4.1765
acer_truncatum_Atru.chr4.1767 acer_truncatum acer_truncatum_Atru.chr4.1767
acer_truncatum_Atru.chr4.1773 acer_truncatum acer_truncatum_Atru.chr4.1773
acer_truncatum_Atru.chr4.2292 acer_truncatum acer_truncatum_Atru.chr4.2292
acer_truncatum_Atru.chr4.2293 acer_truncatum acer_truncatum_Atru.chr4.2293
acer_truncatum_Atru.chr4.2294 acer_truncatum acer_truncatum_Atru.chr4.2294
acer_truncatum_Atru.chr4.2295 acer_truncatum acer_truncatum_Atru.chr4.2295
acer_truncatum_Atru.chr4.2296 acer_truncatum acer_truncatum_Atru.chr4.2296
acer_truncatum_Atru.chr4.2299 acer_truncatum acer_truncatum_Atru.chr4.2299
acer_truncatum_Atru.chr4.2306 acer_truncatum acer_truncatum_Atru.chr4.2306
acer_truncatum_Atru.chr4.2307 acer_truncatum acer_truncatum_Atru.chr4.2307
acer_truncatum_Atru.chr4.2308 acer_truncatum acer_truncatum_Atru.chr4.2308
acer_truncatum_Atru.chr4.2309 acer_truncatum acer_truncatum_Atru.chr4.2309
acer_truncatum_Atru.chr4.2311 acer_truncatum acer_truncatum_Atru.chr4.2311
acer_truncatum_Atru.chr4.2822 acer_truncatum acer_truncatum_Atru.chr4.2822
acer_truncatum_Atru.chr4.2824 acer_truncatum acer_truncatum_Atru.chr4.2824
acer_truncatum_Atru.chr4.2884 acer_truncatum acer_truncatum_Atru.chr4.2884
acer_truncatum_Atru.chr4.2890 acer_truncatum acer_truncatum_Atru.chr4.2890
acer_truncatum_Atru.chr4.815 acer_truncatum acer_truncatum_Atru.chr4.815
acer_truncatum_Atru.chr4.816 acer_truncatum acer_truncatum_Atru.chr4.816
acer_truncatum_Atru.chr5.192 acer_truncatum acer_truncatum_Atru.chr5.192
acer_truncatum_Atru.chr5.3025 acer_truncatum acer_truncatum_Atru.chr5.3025
acer_truncatum_Atru.chr5.3026 acer_truncatum acer_truncatum_Atru.chr5.3026
acer_truncatum_Atru.chr5.3211 acer_truncatum acer_truncatum_Atru.chr5.3211