PlantSME Plant secondary metabolism enzyme database
SGD

SGD

Atlas summary family SGD.

Lineage Coverage
Detected in 766 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Hordeum vulgare
Aegilops tauschii
Triticum turgidum
Prunus fruticosa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
armoracia_rusticana_Arr38452 armoracia_rusticana armoracia_rusticana_Arr38452
armoracia_rusticana_Arr38453 armoracia_rusticana armoracia_rusticana_Arr38453
armoracia_rusticana_Arr39588 armoracia_rusticana armoracia_rusticana_Arr39588
armoracia_rusticana_Arr39774 armoracia_rusticana armoracia_rusticana_Arr39774
armoracia_rusticana_Arr39777 armoracia_rusticana armoracia_rusticana_Arr39777
armoracia_rusticana_Arr40936 armoracia_rusticana armoracia_rusticana_Arr40936
armoracia_rusticana_Arr41387 armoracia_rusticana armoracia_rusticana_Arr41387
armoracia_rusticana_Arr41413 armoracia_rusticana armoracia_rusticana_Arr41413
armoracia_rusticana_Arr4487 armoracia_rusticana armoracia_rusticana_Arr4487
armoracia_rusticana_Arr5531 armoracia_rusticana armoracia_rusticana_Arr5531
armoracia_rusticana_Arr5637 armoracia_rusticana armoracia_rusticana_Arr5637
armoracia_rusticana_Arr6618 armoracia_rusticana armoracia_rusticana_Arr6618
armoracia_rusticana_Arr7858 armoracia_rusticana armoracia_rusticana_Arr7858
armoracia_rusticana_Arr7859 armoracia_rusticana armoracia_rusticana_Arr7859
armoracia_rusticana_Arr7860 armoracia_rusticana armoracia_rusticana_Arr7860
armoracia_rusticana_Arr7862 armoracia_rusticana armoracia_rusticana_Arr7862
armoracia_rusticana_Arr7917 armoracia_rusticana armoracia_rusticana_Arr7917
armoracia_rusticana_Arr8723 armoracia_rusticana armoracia_rusticana_Arr8723
armoracia_rusticana_Arr9381 armoracia_rusticana armoracia_rusticana_Arr9381
armoracia_rusticana_Arr9382 armoracia_rusticana armoracia_rusticana_Arr9382
armoracia_rusticana_Arr9383 armoracia_rusticana armoracia_rusticana_Arr9383
armoracia_rusticana_Arr9384 armoracia_rusticana armoracia_rusticana_Arr9384
armoracia_rusticana_Arr9566 armoracia_rusticana armoracia_rusticana_Arr9566
armoracia_rusticana_Arr9862 armoracia_rusticana armoracia_rusticana_Arr9862
artemisia_argyi_GWHPBRAE000756 artemisia_argyi artemisia_argyi_GWHPBRAE000756
artemisia_argyi_GWHPBRAE002974 artemisia_argyi artemisia_argyi_GWHPBRAE002974
artemisia_argyi_GWHPBRAE004411 artemisia_argyi artemisia_argyi_GWHPBRAE004411
artemisia_argyi_GWHPBRAE008049 artemisia_argyi artemisia_argyi_GWHPBRAE008049
artemisia_argyi_GWHPBRAE008196 artemisia_argyi artemisia_argyi_GWHPBRAE008196
artemisia_argyi_GWHPBRAE008936 artemisia_argyi artemisia_argyi_GWHPBRAE008936