PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
armoracia_rusticana_Arr1373 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr13848 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr18171 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr19803 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr21773 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr21774 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr23735 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr31402 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr32092 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr32103 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr35024 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr35179 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr35180 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr35181 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr35226 Alkaloid 16OMT low borderline
armoracia_rusticana_Arr40098 Alkaloid 16OMT low borderline
armoracia_rusticana_Arr4259 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr5012 Alkaloid 16OMT medium borderline
armoracia_rusticana_Arr14153 Alkaloid 6OMT_4OMT_SOMT low borderline
armoracia_rusticana_Arr10152 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr10448 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr10449 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr10450 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr10615 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr11471 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr11472 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr11677 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr11678 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr11876 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr12269 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr12272 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr12273 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr12274 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr12287 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr12290 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr12292 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr12293 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr12313 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr12316 Alkaloid 7DLGT high pass
armoracia_rusticana_Arr13403 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr13404 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr13617 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr13618 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr13850 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr13954 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr141 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr14147 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr14176 Alkaloid 7DLGT low borderline
armoracia_rusticana_Arr14875 Alkaloid 7DLGT medium pass
armoracia_rusticana_Arr15087 Alkaloid 7DLGT medium pass