PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
Reset
Gene Pathway Family Confidence Status
armoracia_rusticana_Arr10286 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr11913 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr13537 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr15903 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr1764 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr19605 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr20047 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr21951 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr23876 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr25617 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr2722 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr27614 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr27732 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr28546 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr28547 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr28658 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr2909 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr29260 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr31307 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr31932 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr34709 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr34710 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr36727 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr38875 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr4147 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr41748 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr41895 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr5858 Rosmarinic Acid RAS medium pass
armoracia_rusticana_Arr7193 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr8216 Rosmarinic Acid RAS low borderline
armoracia_rusticana_Arr8731 Rosmarinic Acid RAS low borderline