PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr10011 Flavonoid F3H medium borderline
armoracia_rusticana_Arr10271 Flavonoid F3H medium borderline
armoracia_rusticana_Arr10298 Flavonoid F3H medium borderline
armoracia_rusticana_Arr10439 Flavonoid F3H medium borderline
armoracia_rusticana_Arr10541 Flavonoid F3H medium borderline
armoracia_rusticana_Arr11101 Flavonoid F3H medium borderline
armoracia_rusticana_Arr11427 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1145 Flavonoid F3H low borderline
armoracia_rusticana_Arr1190 Flavonoid F3H medium borderline
armoracia_rusticana_Arr11919 Flavonoid F3H medium borderline
armoracia_rusticana_Arr11939 Flavonoid F3H low borderline
armoracia_rusticana_Arr12046 Flavonoid F3H low borderline
armoracia_rusticana_Arr12202 Flavonoid F3H low borderline
armoracia_rusticana_Arr13378 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1357 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1358 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1360 Flavonoid F3H medium borderline
armoracia_rusticana_Arr13749 Flavonoid F3H medium borderline
armoracia_rusticana_Arr14249 Flavonoid F3H medium borderline
armoracia_rusticana_Arr14256 Flavonoid F3H low borderline
armoracia_rusticana_Arr14291 Flavonoid F3H medium borderline
armoracia_rusticana_Arr15796 Flavonoid F3H medium borderline
armoracia_rusticana_Arr16516 Flavonoid F3H medium borderline
armoracia_rusticana_Arr16651 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1667 Flavonoid F3H low borderline
armoracia_rusticana_Arr18248 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1939 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1941 Flavonoid F3H medium borderline
armoracia_rusticana_Arr1967 Flavonoid F3H medium borderline
armoracia_rusticana_Arr19715 Flavonoid F3H medium borderline
armoracia_rusticana_Arr19857 Flavonoid F3H medium borderline
armoracia_rusticana_Arr19940 Flavonoid F3H medium pass
armoracia_rusticana_Arr19945 Flavonoid F3H medium borderline
armoracia_rusticana_Arr20008 Flavonoid F3H low borderline
armoracia_rusticana_Arr20304 Flavonoid F3H low borderline
armoracia_rusticana_Arr20305 Flavonoid F3H low borderline
armoracia_rusticana_Arr20306 Flavonoid F3H low borderline
armoracia_rusticana_Arr20496 Flavonoid F3H low borderline
armoracia_rusticana_Arr20590 Flavonoid F3H medium borderline
armoracia_rusticana_Arr20939 Flavonoid F3H low borderline
armoracia_rusticana_Arr2121 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2126 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2127 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2128 Flavonoid F3H medium borderline
armoracia_rusticana_Arr22122 Flavonoid F3H medium borderline
armoracia_rusticana_Arr22272 Flavonoid F3H low borderline
armoracia_rusticana_Arr22517 Flavonoid F3H medium pass
armoracia_rusticana_Arr22885 Flavonoid F3H medium pass
armoracia_rusticana_Arr22886 Flavonoid F3H medium borderline
armoracia_rusticana_Arr23130 Flavonoid F3H medium borderline