PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr11814 Alkaloid PYKS low borderline
armoracia_rusticana_Arr14611 Alkaloid PYKS low borderline
armoracia_rusticana_Arr17595 Alkaloid PYKS low borderline
armoracia_rusticana_Arr18254 Alkaloid PYKS low borderline
armoracia_rusticana_Arr21463 Alkaloid PYKS low borderline
armoracia_rusticana_Arr23400 Alkaloid PYKS high pass
armoracia_rusticana_Arr24335 Alkaloid PYKS low borderline
armoracia_rusticana_Arr24513 Alkaloid PYKS low borderline
armoracia_rusticana_Arr2512 Alkaloid PYKS high pass
armoracia_rusticana_Arr25350 Alkaloid PYKS low borderline
armoracia_rusticana_Arr2580 Alkaloid PYKS low borderline
armoracia_rusticana_Arr27659 Alkaloid PYKS high pass
armoracia_rusticana_Arr2775 Alkaloid PYKS low borderline
armoracia_rusticana_Arr28804 Alkaloid PYKS low borderline
armoracia_rusticana_Arr28923 Alkaloid PYKS low borderline
armoracia_rusticana_Arr3101 Alkaloid PYKS low borderline
armoracia_rusticana_Arr31395 Alkaloid PYKS high pass
armoracia_rusticana_Arr31439 Alkaloid PYKS low borderline
armoracia_rusticana_Arr31440 Alkaloid PYKS low borderline
armoracia_rusticana_Arr31497 Alkaloid PYKS low borderline
armoracia_rusticana_Arr36231 Alkaloid PYKS high pass
armoracia_rusticana_Arr36615 Alkaloid PYKS low borderline
armoracia_rusticana_Arr37229 Alkaloid PYKS high pass
armoracia_rusticana_Arr38309 Alkaloid PYKS low borderline
armoracia_rusticana_Arr38754 Alkaloid PYKS low borderline
armoracia_rusticana_Arr38755 Alkaloid PYKS low borderline
armoracia_rusticana_Arr4030 Alkaloid PYKS low borderline
armoracia_rusticana_Arr4701 Alkaloid PYKS low borderline
armoracia_rusticana_Arr8491 Alkaloid PYKS low borderline
armoracia_rusticana_Arr9 Alkaloid PYKS high pass
armoracia_rusticana_Arr9838 Alkaloid PYKS high pass