SGD

Atlas summary family SGD.

Lineage Coverage

Detected in 766 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
AMhypScaffold_30135120.1	amaranthus_hypochondriacus	AMhypScaffold_30135120.1
AMhypScaffold_30135130.1	amaranthus_hypochondriacus	AMhypScaffold_30135130.1
AMhypScaffold_30135140.1	amaranthus_hypochondriacus	AMhypScaffold_30135140.1
AMhypScaffold_30135150.1	amaranthus_hypochondriacus	AMhypScaffold_30135150.1
AMhypScaffold_30135160.1	amaranthus_hypochondriacus	AMhypScaffold_30135160.1
AMhypScaffold_30137640.1	amaranthus_hypochondriacus	AMhypScaffold_30137640.1
AMhypScaffold_30141130.1	amaranthus_hypochondriacus	AMhypScaffold_30141130.1
AMhypScaffold_30149380.1	amaranthus_hypochondriacus	AMhypScaffold_30149380.1
AMhypScaffold_40162360.1	amaranthus_hypochondriacus	AMhypScaffold_40162360.1
AMhypScaffold_40162370.1	amaranthus_hypochondriacus	AMhypScaffold_40162370.1
AMhypScaffold_40164410.1	amaranthus_hypochondriacus	AMhypScaffold_40164410.1
AMhypScaffold_40166590.1	amaranthus_hypochondriacus	AMhypScaffold_40166590.1
AMhypScaffold_50177120.1	amaranthus_hypochondriacus	AMhypScaffold_50177120.1
AMhypScaffold_60185670.1	amaranthus_hypochondriacus	AMhypScaffold_60185670.1
AMhypScaffold_60194710.1	amaranthus_hypochondriacus	AMhypScaffold_60194710.1
AMhypScaffold_60196660.1	amaranthus_hypochondriacus	AMhypScaffold_60196660.1
AMhypScaffold_70209830.1	amaranthus_hypochondriacus	AMhypScaffold_70209830.1
AMhypScaffold_80211380.1	amaranthus_hypochondriacus	AMhypScaffold_80211380.1
AMhypScaffold_80218330.1	amaranthus_hypochondriacus	AMhypScaffold_80218330.1
AMhypScaffold_80222150.1	amaranthus_hypochondriacus	AMhypScaffold_80222150.1
AMhypScaffold_90225060.1	amaranthus_hypochondriacus	AMhypScaffold_90225060.1
AMhypScaffold_90225070.1	amaranthus_hypochondriacus	AMhypScaffold_90225070.1
AMhypScaffold_90235780.1	amaranthus_hypochondriacus	AMhypScaffold_90235780.1
MAKER_04039-RA	amaranthus_palmeri	MAKER_04039-RA
MAKER_07531-RA	amaranthus_palmeri	MAKER_07531-RA
MAKER_10674-RA	amaranthus_palmeri	MAKER_10674-RA
MAKER_12230-RA	amaranthus_palmeri	MAKER_12230-RA
MAKER_12629-RA	amaranthus_palmeri	MAKER_12629-RA
MAKER_12659-RA	amaranthus_palmeri	MAKER_12659-RA
MAKER_13563-RA	amaranthus_palmeri	MAKER_13563-RA