SGD

Atlas summary family SGD.

Lineage Coverage

Detected in 766 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 25978 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
MAKER_15245-RA	amaranthus_palmeri	MAKER_15245-RA
MAKER_15872-RA	amaranthus_palmeri	MAKER_15872-RA
MAKER_17700-RA	amaranthus_palmeri	MAKER_17700-RA
MAKER_17702-RA	amaranthus_palmeri	MAKER_17702-RA
MAKER_19140-RA	amaranthus_palmeri	MAKER_19140-RA
MAKER_19141-RA	amaranthus_palmeri	MAKER_19141-RA
MAKER_19350-RA	amaranthus_palmeri	MAKER_19350-RA
MAKER_19514-RA	amaranthus_palmeri	MAKER_19514-RA
MAKER_19515-RA	amaranthus_palmeri	MAKER_19515-RA
MAKER_20210-RA	amaranthus_palmeri	MAKER_20210-RA
MAKER_20837-RA	amaranthus_palmeri	MAKER_20837-RA
MAKER_21018-RA	amaranthus_palmeri	MAKER_21018-RA
MAKER_25435-RA	amaranthus_palmeri	MAKER_25435-RA
MAKER_25436-RA	amaranthus_palmeri	MAKER_25436-RA
MAKER_25867-RA	amaranthus_palmeri	MAKER_25867-RA
MAKER_27409-RA	amaranthus_palmeri	MAKER_27409-RA
MAKER_29476-RA	amaranthus_palmeri	MAKER_29476-RA
MAKER_31307-RA	amaranthus_palmeri	MAKER_31307-RA
MAKER_33058-RA	amaranthus_palmeri	MAKER_33058-RA
MAKER_33059-RA	amaranthus_palmeri	MAKER_33059-RA
MAKER_35638-RA	amaranthus_palmeri	MAKER_35638-RA
MAKER_36765-RA	amaranthus_palmeri	MAKER_36765-RA
MAKER_36767-RA	amaranthus_palmeri	MAKER_36767-RA
MAKER_36862-RA	amaranthus_palmeri	MAKER_36862-RA
amaranthus_tricolor_g10100.t1	amaranthus_tricolor	amaranthus_tricolor_g10100.t1
amaranthus_tricolor_g10129.t1	amaranthus_tricolor	amaranthus_tricolor_g10129.t1
amaranthus_tricolor_g10334.t1	amaranthus_tricolor	amaranthus_tricolor_g10334.t1
amaranthus_tricolor_g10847.t1	amaranthus_tricolor	amaranthus_tricolor_g10847.t1
amaranthus_tricolor_g11974.t1	amaranthus_tricolor	amaranthus_tricolor_g11974.t1
amaranthus_tricolor_g11975.t1	amaranthus_tricolor	amaranthus_tricolor_g11975.t1