TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
solanum_pimpinellifolium_SPIMP08g0246890	solanum_pimpinellifolium	solanum_pimpinellifolium_SPIMP08g0246890
solanum_pimpinellifolium_SPIMP09g0275860	solanum_pimpinellifolium	solanum_pimpinellifolium_SPIMP09g0275860
solanum_rostratum_evm.model.Chr5.980	solanum_rostratum	solanum_rostratum_evm.model.Chr5.980
solanum_sitiens_g20686.t1	solanum_sitiens	solanum_sitiens_g20686.t1
solanum_sitiens_g24123.t1	solanum_sitiens	solanum_sitiens_g24123.t1
solanum_sitiens_g24125.t1	solanum_sitiens	solanum_sitiens_g24125.t1
solanum_sitiens_g25194.t1	solanum_sitiens	solanum_sitiens_g25194.t1
solanum_sitiens_g29272.t1	solanum_sitiens	solanum_sitiens_g29272.t1
solanum_stenotomum_XP_049377830.1	solanum_stenotomum	solanum_stenotomum_XP_049377830.1
solanum_stenotomum_XP_049377832.1	solanum_stenotomum	solanum_stenotomum_XP_049377832.1
solanum_stenotomum_XP_049378183.1	solanum_stenotomum	solanum_stenotomum_XP_049378183.1
solanum_stenotomum_XP_049378218.1	solanum_stenotomum	solanum_stenotomum_XP_049378218.1
solanum_stenotomum_XP_049378228.1	solanum_stenotomum	solanum_stenotomum_XP_049378228.1
solanum_stenotomum_XP_049388732.1	solanum_stenotomum	solanum_stenotomum_XP_049388732.1
solanum_stenotomum_XP_049388733.1	solanum_stenotomum	solanum_stenotomum_XP_049388733.1
solanum_stenotomum_XP_049405658.1	solanum_stenotomum	solanum_stenotomum_XP_049405658.1
Stub00G0013540.1	solanum_tuberosum	Stub00G0013540.1
Stub00G0013540.2	solanum_tuberosum	Stub00G0013540.2
Stub00G0013540.3	solanum_tuberosum	Stub00G0013540.3
Stub01G0043780.1	solanum_tuberosum	Stub01G0043780.1
Stub03G0020500.2	solanum_tuberosum	Stub03G0020500.2
Stub05G0018840.2	solanum_tuberosum	Stub05G0018840.2
Stub06G0027530.1	solanum_tuberosum	Stub06G0027530.1
Stub08G0026020.1	solanum_tuberosum	Stub08G0026020.1
Stub08G0026020.2	solanum_tuberosum	Stub08G0026020.2
Stub10G0002930.1	solanum_tuberosum	Stub10G0002930.1
Stub11G0019500.1	solanum_tuberosum	Stub11G0019500.1
sonneratia_alba_SA_00234	sonneratia_alba	sonneratia_alba_SA_00234
sonneratia_alba_SA_14723	sonneratia_alba	sonneratia_alba_SA_14723
sonneratia_alba_SA_26937	sonneratia_alba	sonneratia_alba_SA_26937