TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
sonneratia_caseolaris_Sc2_11926	sonneratia_caseolaris	sonneratia_caseolaris_Sc2_11926
sonneratia_caseolaris_Sc2_13798	sonneratia_caseolaris	sonneratia_caseolaris_Sc2_13798
sonneratia_caseolaris_Sc2_26263	sonneratia_caseolaris	sonneratia_caseolaris_Sc2_26263
Sbic03G0045940.1	sorghum_bicolor	Sbic03G0045940.1
Sbic04G0017750.1	sorghum_bicolor	Sbic04G0017750.1
sparganium_stoloniferum_evm.model.Chr10.407	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr10.407
sparganium_stoloniferum_evm.model.Chr2.1137	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr2.1137
sparganium_stoloniferum_evm.model.Chr4.2011	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr4.2011
sparganium_stoloniferum_evm.model.Chr5.117	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr5.117
sparganium_stoloniferum_evm.model.Chr5.124	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr5.124
sparganium_stoloniferum_evm.model.Chr5.125	sparganium_stoloniferum	sparganium_stoloniferum_evm.model.Chr5.125
TKY45449.1	spatholobus_suberectus	TKY45449.1
TKY51390.1	spatholobus_suberectus	TKY51390.1
TKY51393.1	spatholobus_suberectus	TKY51393.1
TKY59543.1	spatholobus_suberectus	TKY59543.1
TKY64933.1	spatholobus_suberectus	TKY64933.1
TKY71278.1	spatholobus_suberectus	TKY71278.1
speranskia_yunnanensis_evm.model.ctg000080_np1212.1253	speranskia_yunnanensis	speranskia_yunnanensis_evm.model.ctg000080_np1212.1253
Sdon605010066130	sphaerocarpos_donnellii	Sdon605010066130
Sdon655540080620	sphaerocarpos_donnellii	Sdon655540080620
Sgircontig_3510135430	sphagnum_girgensohnii	Sgircontig_3510135430
Sgircontig_6070222760	sphagnum_girgensohnii	Sgircontig_6070222760
Sgircontig_8200291560	sphagnum_girgensohnii	Sgircontig_8200291560
Sgircontig_9430333680	sphagnum_girgensohnii	Sgircontig_9430333680
Spal3560690291450	sphagnum_palustre	Spal3560690291450
Spal3561420294860	sphagnum_palustre	Spal3561420294860
Spal3582630383560	sphagnum_palustre	Spal3582630383560
Sole01G0025570	spinacia_oleracea	Sole01G0025570
Sole02G0016490	spinacia_oleracea	Sole02G0016490
Sole02G0016510	spinacia_oleracea	Sole02G0016510