TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
syringa_oblata_Ob0249891.1	syringa_oblata	syringa_oblata_Ob0249891.1
syzygium_aromaticum_saro010562-1.1	syzygium_aromaticum	syzygium_aromaticum_saro010562-1.1
syzygium_aromaticum_saro013582-1.1	syzygium_aromaticum	syzygium_aromaticum_saro013582-1.1
syzygium_aromaticum_saro025859-1.1	syzygium_aromaticum	syzygium_aromaticum_saro025859-1.1
syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1688.mRNA1	syzygium_grande	syzygium_grande_EVM%20prediction%20Scaffold_1__1_contigs__length_41797999.1688.mRNA1
syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1348.mRNA1	syzygium_grande	syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1348.mRNA1
syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1349.mRNA1	syzygium_grande	syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1349.mRNA1
syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1350.mRNA1	syzygium_grande	syzygium_grande_EVM%20prediction%20Scaffold_4__1_contigs__length_30130455.1350.mRNA1
syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.2498.mRNA1	syzygium_grande	syzygium_grande_EVM%20prediction%20Scaffold_6__1_contigs__length_43109846.2498.mRNA1
tagetes_erecta_GWHPDOCX026762	tagetes_erecta	tagetes_erecta_GWHPDOCX026762
TlepHiC_scaffold_20023740	takakia_lepidozioides	TlepHiC_scaffold_20023740
TlepHiC_scaffold_20075430	takakia_lepidozioides	TlepHiC_scaffold_20075430
TlepHiC_scaffold_60235130	takakia_lepidozioides	TlepHiC_scaffold_60235130
TlepHiC_scaffold_60235330	takakia_lepidozioides	TlepHiC_scaffold_60235330
tamarix_chinensis_TC03G2859T1	tamarix_chinensis	tamarix_chinensis_TC03G2859T1
tapiscia_sinensis_evm.model.scaf_41.222	tapiscia_sinensis	tapiscia_sinensis_evm.model.scaf_41.222
tapiscia_sinensis_evm.model.scaf_57.195	tapiscia_sinensis	tapiscia_sinensis_evm.model.scaf_57.195
TchiHiC_scaffold_100073690.1	taxus_chinensis	TchiHiC_scaffold_100073690.1
TchiHiC_scaffold_20191040.1	taxus_chinensis	TchiHiC_scaffold_20191040.1
TchiHiC_scaffold_40239170.1	taxus_chinensis	TchiHiC_scaffold_40239170.1
TchiHiC_scaffold_50267000.1	taxus_chinensis	TchiHiC_scaffold_50267000.1
tectona_grandis_Tg03g05590.t1	tectona_grandis	tectona_grandis_Tg03g05590.t1
tectona_grandis_Tg03g06070.t1	tectona_grandis	tectona_grandis_Tg03g06070.t1
PNH06310.1_tsocial	tetrabaena_socialis	PNH06310.1_tsocial
KAF8377159.1	tetracentron_sinense	KAF8377159.1
KAF8378030.1	tetracentron_sinense	KAF8378030.1
KAF8411649.1	tetracentron_sinense	KAF8411649.1
KAF8412054.1	tetracentron_sinense	KAF8412054.1
tetraena_mongolica_TmoA08G016770.1	tetraena_mongolica	tetraena_mongolica_TmoA08G016770.1
tetraena_mongolica_TmoA12G013740.1	tetraena_mongolica	tetraena_mongolica_TmoA12G013740.1