PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
tetraena_mongolica_TmoA14G001970.1 tetraena_mongolica tetraena_mongolica_TmoA14G001970.1
tetraena_mongolica_TmoB12G015320.1 tetraena_mongolica tetraena_mongolica_TmoB12G015320.1
tetraena_mongolica_TmoB14G002240.1 tetraena_mongolica tetraena_mongolica_TmoB14G002240.1
tetraena_mongolica_Tmoptg000093lG000940.1 tetraena_mongolica tetraena_mongolica_Tmoptg000093lG000940.1
Tfil1463430004180 tetralophozia_filiformis Tfil1463430004180
Tfil2302600170390 tetralophozia_filiformis Tfil2302600170390
Tpelscaffold_20030520 tetraphis_pellucida Tpelscaffold_20030520
Tpelscaffold_20030540 tetraphis_pellucida Tpelscaffold_20030540
Tpelscaffold_70170660 tetraphis_pellucida Tpelscaffold_70170660
KAF5183052.1[Thalictrum thalictrum_thalictroides KAF5183052.1[Thalictrum
THsancontig_1230045380 thamnobryum_sandei THsancontig_1230045380
THsancontig_2230178510 thamnobryum_sandei THsancontig_2230178510
THsancontig_2540203670 thamnobryum_sandei THsancontig_2540203670
THsancontig_3230315320 thamnobryum_sandei THsancontig_3230315320
THsancontig_360377580 thamnobryum_sandei THsancontig_360377580
THsancontig_3690384680 thamnobryum_sandei THsancontig_3690384680
THsancontig_3730389520 thamnobryum_sandei THsancontig_3730389520
THsancontig_3790401450 thamnobryum_sandei THsancontig_3790401450
THsancontig_820512980 thamnobryum_sandei THsancontig_820512980
THsancontig_850515270 thamnobryum_sandei THsancontig_850515270
THsancontig_910521720 thamnobryum_sandei THsancontig_910521720
Tcac02G0019280.1 theobroma_cacao Tcac02G0019280.1
Tcac08G0014200.1 theobroma_cacao Tcac08G0014200.1
thinopyrum_elongatum_GWHPABKY000724 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY000724
thinopyrum_elongatum_GWHPABKY000725 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY000725
thinopyrum_elongatum_GWHPABKY000726 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY000726
thinopyrum_elongatum_GWHPABKY000727 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY000727
thinopyrum_elongatum_GWHPABKY009323 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY009323
thinopyrum_elongatum_GWHPABKY011894 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY011894
thinopyrum_elongatum_GWHPABKY019312 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY019312