PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
thinopyrum_elongatum_GWHPABKY019315 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY019315
thinopyrum_elongatum_GWHPABKY019317 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY019317
thinopyrum_elongatum_GWHPABKY019319 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY019319
thinopyrum_elongatum_GWHPABKY019321 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY019321
thinopyrum_elongatum_GWHPABKY036734 thinopyrum_elongatum thinopyrum_elongatum_GWHPABKY036734
TarvThla_scaffold1300051820.1 thlaspi_arvense TarvThla_scaffold1300051820.1
TarvThla_scaffold2250160750.1 thlaspi_arvense TarvThla_scaffold2250160750.1
tiarella_polyphylla_GWHPBKAH006171 tiarella_polyphylla tiarella_polyphylla_GWHPBKAH006171
tiarella_polyphylla_GWHPBKAH015092 tiarella_polyphylla tiarella_polyphylla_GWHPBKAH015092
Tmegctg001550_pilon_pilon_pilon0029560 timmia_megapolitana Tmegctg001550_pilon_pilon_pilon0029560
Tmegctg001550_pilon_pilon_pilon0032570 timmia_megapolitana Tmegctg001550_pilon_pilon_pilon0032570
Tmegctg002520_pilon_pilon_pilon0047810 timmia_megapolitana Tmegctg002520_pilon_pilon_pilon0047810
Tmegctg012290_pilon_pilon_pilon0192780 timmia_megapolitana Tmegctg012290_pilon_pilon_pilon0192780
Tmegctg012290_pilon_pilon_pilon0192790 timmia_megapolitana Tmegctg012290_pilon_pilon_pilon0192790
Tmegctg012300_pilon_pilon_pilon0200380 timmia_megapolitana Tmegctg012300_pilon_pilon_pilon0200380
TOsin04G0006850 toona_sinensis TOsin04G0006850
TOsin09G0001890 toona_sinensis TOsin09G0001890
TOsin10G0009310 toona_sinensis TOsin10G0009310
trapa_bicornis_GWHPBOVS010176 trapa_bicornis trapa_bicornis_GWHPBOVS010176
trapa_bicornis_GWHPBOVS021959 trapa_bicornis trapa_bicornis_GWHPBOVS021959
trapa_incisa_GWHPCBIN009785 trapa_incisa trapa_incisa_GWHPCBIN009785
trapa_incisa_GWHPCBIN014100 trapa_incisa trapa_incisa_GWHPCBIN014100
trapa_incisa_GWHPCBIN021327 trapa_incisa trapa_incisa_GWHPCBIN021327
trapa_incisa_GWHPCBIN021892 trapa_incisa trapa_incisa_GWHPCBIN021892
trapa_incisa_GWHPCBIN028474 trapa_incisa trapa_incisa_GWHPCBIN028474
PON81983.1[Trema trema_orientale PON81983.1[Trema
PON83067.1[Trema trema_orientale PON83067.1[Trema
Treubia2510102240 treubia Treubia2510102240
MCH88477.1[Trifolium trifolium_medium MCH88477.1[Trifolium
MCI11296.1[Trifolium trifolium_medium MCI11296.1[Trifolium