PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
TOsin03G0004710 Alkaloid 16OMT low borderline
TOsin03G0004720 Alkaloid 16OMT medium borderline
TOsin04G0003870 Alkaloid 16OMT low borderline
TOsin07G0002490 Alkaloid 16OMT low borderline
TOsin10G0003980 Alkaloid 16OMT low borderline
TOsin03G0004730 Alkaloid 6OMT_4OMT_SOMT medium pass
TOsin04G0003860 Alkaloid 6OMT_4OMT_SOMT low borderline
TOsin23G0004340 Alkaloid 6OMT_4OMT_SOMT medium borderline
TOsin24G0019330 Alkaloid 6OMT_4OMT_SOMT medium borderline
TOsin27G0008870 Alkaloid 6OMT_4OMT_SOMT medium borderline
TOsin28G0000740 Alkaloid 6OMT_4OMT_SOMT medium borderline
TOsin03G0000920 Alkaloid 7DLGT low borderline
TOsin03G0004780 Alkaloid 7DLGT low borderline
TOsin03G0004790 Alkaloid 7DLGT low borderline
TOsin04G0003810 Alkaloid 7DLGT low borderline
TOsin05G0000390 Alkaloid 7DLGT low borderline
TOsin05G0004290 Alkaloid 7DLGT low borderline
TOsin05G0006760 Alkaloid 7DLGT medium pass
TOsin06G0002570 Alkaloid 7DLGT low borderline
TOsin06G0002580 Alkaloid 7DLGT medium pass
TOsin06G0002590 Alkaloid 7DLGT high pass
TOsin06G0008970 Alkaloid 7DLGT medium pass
TOsin06G0008990 Alkaloid 7DLGT low borderline
TOsin06G0009000 Alkaloid 7DLGT low borderline
TOsin06G0009040 Alkaloid 7DLGT low borderline
TOsin07G0008820 Alkaloid 7DLGT medium pass
TOsin07G0008830 Alkaloid 7DLGT low borderline
TOsin08G0002690 Alkaloid 7DLGT medium pass
TOsin08G0009650 Alkaloid 7DLGT low borderline
TOsin09G0004160 Alkaloid 7DLGT low borderline
TOsin09G0008180 Alkaloid 7DLGT medium pass
TOsin10G0009260 Alkaloid 7DLGT low borderline
TOsin11G0001620 Alkaloid 7DLGT low borderline
TOsin11G0002920 Alkaloid 7DLGT high pass
TOsin11G0003710 Alkaloid 7DLGT low borderline
TOsin11G0006940 Alkaloid 7DLGT low borderline
TOsin12G0002860 Alkaloid 7DLGT low borderline
TOsin12G0002870 Alkaloid 7DLGT medium pass
TOsin12G0002880 Alkaloid 7DLGT low borderline
TOsin12G0004390 Alkaloid 7DLGT medium pass
TOsin12G0005930 Alkaloid 7DLGT low borderline
TOsin12G0006570 Alkaloid 7DLGT medium pass
TOsin12G0008250 Alkaloid 7DLGT low borderline
TOsin12G0008320 Alkaloid 7DLGT low borderline
TOsin12G0008420 Alkaloid 7DLGT low borderline
TOsin13G0004910 Alkaloid 7DLGT low borderline
TOsin13G0010140 Alkaloid 7DLGT low borderline
TOsin14G0003630 Alkaloid 7DLGT medium pass
TOsin14G0006990 Alkaloid 7DLGT medium pass
TOsin15G0005510 Alkaloid 7DLGT low borderline