PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
TOsin07G0009240 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin07G0009250 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin08G0002360 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
TOsin08G0002370 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin09G0000260 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin09G0001210 Flavonoid CHS medium pass CHS__00004__sp_C6KI62_CHSL1_CANSA
TOsin09G0001500 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin10G0009760 Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
TOsin10G0011030 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
TOsin21G0006460 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
TOsin22G0002980 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
TOsin23G0005180 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin23G0023630 Flavonoid CHS low borderline CHS__00011__sp_Q9FUB7_CHSY_HYPAN
TOsin24G0018270 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
TOsin27G0002530 Flavonoid CHS medium pass CHS__00005__sp_O80400_VPS_HUMLU
TOsin27G0002540 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
TOsin27G0002630 Flavonoid CHS medium pass CHS__00005__sp_O80400_VPS_HUMLU
TOsin28G0005630 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
TOsin28G0005720 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
TOsinHiC_scaffold_1470003130 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN