Toona sinensis (toona_sinensis)
Imported from atlas release summary for Toona sinensis.
1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1192
Candidate Genes
BAHD
7.5%
POD
5.83%
C4H
5.22%
4CL
4.75%
UGT
4.27%
C3'H/CYP98A
4.04%
NMT
3.36%
F3H
3.12%
Other Families
61.91%
More Families (98)
7DLGT
90
3.05%
IFS
90
3.05%
CYP76
86
2.92%
UFGT
72
2.44%
H6H
57
1.93%
T3O
57
1.93%
SMT1/SMT2/SMT3
57
1.93%
IFR
54
1.83%
F3'H/CYP75B
54
1.83%
DWF4/CYP90B1
54
1.83%
STR
50
1.7%
CODM/T6ODM
49
1.66%
CAD
41
1.39%
CYP71
41
1.39%
CAS
34
1.15%
G8O/G8H
32
1.09%
BR6OX2/CYP85A2
32
1.09%
GS
29
0.98%
CYP90D1
29
0.98%
PYKS
28
0.95%
FNS
28
0.95%
CCR
27
0.92%
CSE
26
0.88%
LAC
26
0.88%
7DLH
24
0.81%
T16H
23
0.78%
DFR
23
0.78%
SGD
22
0.75%
ANR
22
0.75%
IO
21
0.71%
NCS
20
0.68%
CHS
20
0.68%
HCT
20
0.68%
SLS
18
0.61%
ANS/LDOX
18
0.61%
CPD/CYP90A1
18
0.61%
F3'5'H/CYP75A
17
0.58%
RAS
17
0.58%
TRI/TRII
15
0.51%
CNMT
15
0.51%
8HGO
15
0.51%
TAT
15
0.51%
CPR
15
0.51%
COMT
14
0.47%
TPS
14
0.47%
AACT
13
0.44%
GES
11
0.37%
PMT
11
0.37%
CYP719
11
0.37%
F5H/CYP84A
11
0.37%
BR6OX1/CYP85A1
11
0.37%
ROT3/CYP90C1
11
0.37%
COR
10
0.34%
CYP80B1
10
0.34%
ISY
10
0.34%
CCoAOMT
10
0.34%
GGPPS
9
0.31%
MPO
8
0.27%
SQE
8
0.27%
SMO1/SMO2
8
0.27%
FPPS
8
0.27%
MVD
7
0.24%
DXS
7
0.24%
MVK
7
0.24%
TYDC_DDC
6
0.2%
6OMT_4OMT_SOMT
6
0.2%
CYP51G1
6
0.2%
MCT/IspD
6
0.2%
HMGR
6
0.2%
16OMT
5
0.17%
XMT_MXMT_DXMT
5
0.17%
HPPR
5
0.17%
SQS/FDFT1
5
0.17%
PMK
5
0.17%
LAMT
4
0.14%
CHI
4
0.14%
DET2
4
0.14%
DWF7
4
0.14%
HMGS
4
0.14%
CMK/IspE
4
0.14%
TDC
3
0.1%
ADC
3
0.1%
PAL
3
0.1%
HYD1
3
0.1%
IDI
3
0.1%
ODC
2
0.07%
DWF5
2
0.07%
DWF1
2
0.07%
GPPS
2
0.07%
HDS/IspG
2
0.07%
MDS/IspF
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
CYP80F1
1
0.03%
BBE
1
0.03%
FLS
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 382 | 20 | BAHD (162) | View species results |
| Phenylpropanoid pathway | 266 | 12 | POD (149) | View species results |
| Alkaloid pathway | 231 | 23 | NMT (62) | View species results |
| Flavonoid pathway | 164 | 14 | UFGT (59) | View species results |
| Steroid pathway | 75 | 12 | SMT1/SMT2/SMT3 (26) | View species results |
| Rosmarinic acid pathway | 74 | 7 | 4CL (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 930 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 258 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| TOsin03G0005080 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin04G0003590 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin09G0008670 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin14G0005450 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin15G0000510 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin15G0009230 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin16G0005260 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin16G0014070 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin21G0005100 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin23G0001170 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin23G0005750 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin23G0010280 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin23G0019120 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin24G0013290 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin24G0017770 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin24G0022550 | Phenylpropanoid | HCT | low | borderline | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin25G0002340 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| TOsin26G0010550 | Phenylpropanoid | HCT | low | borderline | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsin26G0010560 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| TOsinHiC_scaffold_430004840 | Phenylpropanoid | HCT | low | borderline | HCT__00001__sp_Q8GSM7_HST_TOBAC |