PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
TOsin05G0006220 Phenylpropanoid LAC low borderline
TOsin05G0006830 Phenylpropanoid LAC low borderline
TOsin06G0002510 Phenylpropanoid LAC low borderline
TOsin06G0003230 Phenylpropanoid LAC medium pass
TOsin06G0003260 Phenylpropanoid LAC medium pass
TOsin09G0002690 Phenylpropanoid LAC medium pass
TOsin09G0002700 Phenylpropanoid LAC medium pass
TOsin09G0002710 Phenylpropanoid LAC medium pass
TOsin09G0002720 Phenylpropanoid LAC medium pass
TOsin10G0008410 Phenylpropanoid LAC medium pass
TOsin10G0008420 Phenylpropanoid LAC medium pass
TOsin10G0008540 Phenylpropanoid LAC low borderline
TOsin11G0000620 Phenylpropanoid LAC low borderline
TOsin11G0000630 Phenylpropanoid LAC medium pass
TOsin11G0006420 Phenylpropanoid LAC low borderline
TOsin12G0009370 Phenylpropanoid LAC low borderline
TOsin15G0008920 Phenylpropanoid LAC medium pass
TOsin16G0005550 Phenylpropanoid LAC medium pass
TOsin17G0005830 Phenylpropanoid LAC medium pass
TOsin17G0008670 Phenylpropanoid LAC medium pass
TOsin17G0012190 Phenylpropanoid LAC low borderline
TOsin18G0003350 Phenylpropanoid LAC low borderline
TOsin19G0011080 Phenylpropanoid LAC medium pass
TOsin24G0004060 Phenylpropanoid LAC medium pass
TOsin24G0020370 Phenylpropanoid LAC low borderline
TOsinHiC_scaffold_1300001400 Phenylpropanoid LAC low borderline