PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Aeve05G0035720.1 aeschynomene_evenia Aeve05G0035720.1
Aeve07G0022560.1 aeschynomene_evenia Aeve07G0022560.1
AaraAA_scaffold17380093370 aethionema_arabicum AaraAA_scaffold17380093370
AaraAA_scaffold17480094780 aethionema_arabicum AaraAA_scaffold17480094780
AaraAA_scaffold25130136390 aethionema_arabicum AaraAA_scaffold25130136390
AaraAA_scaffold27180145770 aethionema_arabicum AaraAA_scaffold27180145770
AaraAA_scaffold46500236020 aethionema_arabicum AaraAA_scaffold46500236020
AaraAA_scaffold60050316170 aethionema_arabicum AaraAA_scaffold60050316170
GWHPBISH013650 akebia_trifoliata GWHPBISH013650
GWHPBISH017176 akebia_trifoliata GWHPBISH017176
GWHPBISH019912 akebia_trifoliata GWHPBISH019912
GWHPBISH019926 akebia_trifoliata GWHPBISH019926
GWHPBISH019930 akebia_trifoliata GWHPBISH019930
Avestig00000119_pilon0063110.1 aldrovanda_vesiculosa Avestig00000119_pilon0063110.1
Avestig00000205_pilon0084320.1 aldrovanda_vesiculosa Avestig00000205_pilon0084320.1
Avestig00000314_pilon0099340.1 aldrovanda_vesiculosa Avestig00000314_pilon0099340.1
Avestig00010748_pilon0235800.1 aldrovanda_vesiculosa Avestig00010748_pilon0235800.1
Agluscaffold1258_cov1050039880 alnus_glutinosa Agluscaffold1258_cov1050039880
Agluscaffold22670_cov1050139990 alnus_glutinosa Agluscaffold22670_cov1050139990
Agluscaffold35220_cov1060210770 alnus_glutinosa Agluscaffold35220_cov1060210770
alnus_rubra_ALNRU00028611-RA alnus_rubra alnus_rubra_ALNRU00028611-RA
alnus_rubra_ALNRU00028615-RA alnus_rubra alnus_rubra_ALNRU00028615-RA
alnus_rubra_ALNRU00086006-RA alnus_rubra alnus_rubra_ALNRU00086006-RA
alstonia_scholaris_tjs03698 alstonia_scholaris alstonia_scholaris_tjs03698
alstonia_scholaris_tjs11064 alstonia_scholaris alstonia_scholaris_tjs11064
alstonia_scholaris_tjs13371 alstonia_scholaris alstonia_scholaris_tjs13371
alstonia_scholaris_tjs22390 alstonia_scholaris alstonia_scholaris_tjs22390
alstonia_scholaris_tjs28138 alstonia_scholaris alstonia_scholaris_tjs28138
alstonia_scholaris_tjs28489 alstonia_scholaris alstonia_scholaris_tjs28489
alstonia_scholaris_tjs32714 alstonia_scholaris alstonia_scholaris_tjs32714