PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
artocarpus_nanchuanensis_EVM0012265.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0012265.1
artocarpus_nanchuanensis_EVM0021628.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0021628.1
artocarpus_nanchuanensis_EVM0023882.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0023882.1
artocarpus_nanchuanensis_EVM0024789.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0024789.1
artocarpus_nanchuanensis_EVM0025882.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0025882.1
artocarpus_nanchuanensis_EVM0026295.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0026295.1
artocarpus_nanchuanensis_EVM0032878.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0032878.1
asparagus_kiusianus_K1p1ch03g02104 asparagus_kiusianus asparagus_kiusianus_K1p1ch03g02104
asparagus_kiusianus_K1p1ch06g36522 asparagus_kiusianus asparagus_kiusianus_K1p1ch06g36522
asparagus_kiusianus_K1p1ch07g41018 asparagus_kiusianus asparagus_kiusianus_K1p1ch07g41018
asparagus_kiusianus_K1p1ch07g41019 asparagus_kiusianus asparagus_kiusianus_K1p1ch07g41019
asparagus_kiusianus_K1p1ch07g41020 asparagus_kiusianus asparagus_kiusianus_K1p1ch07g41020
asparagus_kiusianus_K1p1ch07g41021 asparagus_kiusianus asparagus_kiusianus_K1p1ch07g41021
Aoff03G0012080.1 asparagus_officinalis Aoff03G0012080.1
Aoff06G0004780.1 asparagus_officinalis Aoff06G0004780.1
Aoff06G0010030.1 asparagus_officinalis Aoff06G0010030.1
Aset06G0006160.1 asparagus_setaceus Aset06G0006160.1
Aset06G0006170.1 asparagus_setaceus Aset06G0006170.1
Aset09G0005760.1 asparagus_setaceus Aset09G0005760.1
Abu2g_013660.1 atalantia_buxifolia Abu2g_013660.1
Abu5g_025930.1 atalantia_buxifolia Abu5g_025930.1
Abu7g_019180.1 atalantia_buxifolia Abu7g_019180.1
Abuxscaffold131830033800.1 atlantia_buxifolia Abuxscaffold131830033800.1
Abuxscaffold131830033800.2 atlantia_buxifolia Abuxscaffold131830033800.2
Abuxscaffold131830033800.3 atlantia_buxifolia Abuxscaffold131830033800.3
Abuxscaffold131830033800.4 atlantia_buxifolia Abuxscaffold131830033800.4
Abuxscaffold131830033800.6 atlantia_buxifolia Abuxscaffold131830033800.6
Abuxscaffold131830033800.8 atlantia_buxifolia Abuxscaffold131830033800.8
Abuxscaffold176950066220.1 atlantia_buxifolia Abuxscaffold176950066220.1
Abuxscaffold176950066220.2 atlantia_buxifolia Abuxscaffold176950066220.2