PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
EVM0011034.mRNA1 aristolochia_contorta EVM0011034.mRNA1
EVM0012615.mRNA1 aristolochia_contorta EVM0012615.mRNA1
armoracia_rusticana_Arr13023 armoracia_rusticana armoracia_rusticana_Arr13023
armoracia_rusticana_Arr18846 armoracia_rusticana armoracia_rusticana_Arr18846
armoracia_rusticana_Arr24787 armoracia_rusticana armoracia_rusticana_Arr24787
armoracia_rusticana_Arr40775 armoracia_rusticana armoracia_rusticana_Arr40775
armoracia_rusticana_Arr5990 armoracia_rusticana armoracia_rusticana_Arr5990
armoracia_rusticana_Arr9596 armoracia_rusticana armoracia_rusticana_Arr9596
artemisia_argyi_GWHPBRAE003994 artemisia_argyi artemisia_argyi_GWHPBRAE003994
artemisia_argyi_GWHPBRAE003995 artemisia_argyi artemisia_argyi_GWHPBRAE003995
artemisia_argyi_GWHPBRAE006014 artemisia_argyi artemisia_argyi_GWHPBRAE006014
artemisia_argyi_GWHPBRAE032823 artemisia_argyi artemisia_argyi_GWHPBRAE032823
artemisia_tridentata_ANN30339-RA artemisia_tridentata artemisia_tridentata_ANN30339-RA
artemisia_tridentata_ANN43263-RA artemisia_tridentata artemisia_tridentata_ANN43263-RA
Aaltiscaffold13350051980.1 artocarpus_altilis Aaltiscaffold13350051980.1
Aaltiscaffold2020144130.1 artocarpus_altilis Aaltiscaffold2020144130.1
Aaltiscaffold2590183010.1 artocarpus_altilis Aaltiscaffold2590183010.1
Aaltiscaffold2760191420.1 artocarpus_altilis Aaltiscaffold2760191420.1
Aaltiscaffold30150201540.1 artocarpus_altilis Aaltiscaffold30150201540.1
Aaltiscaffold3340213920.1 artocarpus_altilis Aaltiscaffold3340213920.1
Aaltiscaffold4510245300.1 artocarpus_altilis Aaltiscaffold4510245300.1
Aaltiscaffold48820248460.1 artocarpus_altilis Aaltiscaffold48820248460.1
Ahetscaffold15490037630.1 artocarpus_heterophyllus Ahetscaffold15490037630.1
Ahetscaffold1801140105490.1 artocarpus_heterophyllus Ahetscaffold1801140105490.1
Ahetscaffold1806920171080.1 artocarpus_heterophyllus Ahetscaffold1806920171080.1
Ahetscaffold1809440190340.1 artocarpus_heterophyllus Ahetscaffold1809440190340.1
Ahetscaffold24510232390.1 artocarpus_heterophyllus Ahetscaffold24510232390.1
Ahetscaffold58240306290.1 artocarpus_heterophyllus Ahetscaffold58240306290.1
Ahetscaffold8840346590.1 artocarpus_heterophyllus Ahetscaffold8840346590.1
artocarpus_nanchuanensis_EVM0002645.1 artocarpus_nanchuanensis artocarpus_nanchuanensis_EVM0002645.1