PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
bauhinia_variegata_KAI4313599.1 bauhinia_variegata bauhinia_variegata_KAI4313599.1
bauhinia_variegata_KAI4315106.1 bauhinia_variegata bauhinia_variegata_KAI4315106.1
bauhinia_variegata_KAI4327306.1 bauhinia_variegata bauhinia_variegata_KAI4327306.1
bauhinia_variegata_KAI4347334.1 bauhinia_variegata bauhinia_variegata_KAI4347334.1
bauhinia_variegata_KAI4347694.1 bauhinia_variegata bauhinia_variegata_KAI4347694.1
bauhinia_variegata_KAI4350257.1 bauhinia_variegata bauhinia_variegata_KAI4350257.1
bauhinia_variegata_KAI4351472.1 bauhinia_variegata bauhinia_variegata_KAI4351472.1
bauhinia_variegata_KAI4357371.1 bauhinia_variegata bauhinia_variegata_KAI4357371.1
Btri1004010000880 bazzania_tridens Btri1004010000880
Btri1280610139750 bazzania_tridens Btri1280610139750
Btri1284340173260 bazzania_tridens Btri1284340173260
Bfucscaffold1113_cov1510018770 begonia_fuchsioides Bfucscaffold1113_cov1510018770
Bfucscaffold2678_cov1260217350 begonia_fuchsioides Bfucscaffold2678_cov1260217350
Bfucscaffold3013_cov1430243080 begonia_fuchsioides Bfucscaffold3013_cov1430243080
Bfucscaffold3221_cov1270262840 begonia_fuchsioides Bfucscaffold3221_cov1270262840
Bfucscaffold344_cov1210278410 begonia_fuchsioides Bfucscaffold344_cov1210278410
Bfucscaffold458_cov1200344010 begonia_fuchsioides Bfucscaffold458_cov1200344010
Bfucscaffold5381_cov1610373320 begonia_fuchsioides Bfucscaffold5381_cov1610373320
Bfucscaffold6506_cov1270407950 begonia_fuchsioides Bfucscaffold6506_cov1270407950
Bfucscaffold8854_cov1350463130 begonia_fuchsioides Bfucscaffold8854_cov1350463130
Bhis03G0008320.1 benincasa_hispida Bhis03G0008320.1
Bhis08G0016040.1 benincasa_hispida Bhis08G0016040.1
Bhis12G0008740.1 benincasa_hispida Bhis12G0008740.1
Bhis12G0008750.1 benincasa_hispida Bhis12G0008750.1
Bhis12G0010420.1 benincasa_hispida Bhis12G0010420.1
Bhis12G0021700.1 benincasa_hispida Bhis12G0021700.1
Bpatpat_scaffold14550067520.1 beta_patula Bpatpat_scaffold14550067520.1
Bpatpat_scaffold1910100040.1 beta_patula Bpatpat_scaffold1910100040.1
Bpatpat_scaffold27040149010.1 beta_patula Bpatpat_scaffold27040149010.1
Bpatpat_scaffold31630171540.1 beta_patula Bpatpat_scaffold31630171540.1