TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Bpatpat_scaffold31630171560.2	beta_patula	Bpatpat_scaffold31630171560.2
Bpatpat_scaffold31630171560.3	beta_patula	Bpatpat_scaffold31630171560.3
Bpatpat_scaffold7680250210.1	beta_patula	Bpatpat_scaffold7680250210.1
Bpatpat_scaffold9890272050.1	beta_patula	Bpatpat_scaffold9890272050.1
BEvul06G0018660.1	beta_vulgaris	BEvul06G0018660.1
BEvul06G0023040.1	beta_vulgaris	BEvul06G0023040.1
BEvul06G0023050.1	beta_vulgaris	BEvul06G0023050.1
BEvul06G0023070.1	beta_vulgaris	BEvul06G0023070.1
BEvul08G0012290.1	beta_vulgaris	BEvul08G0012290.1
BEvul09G0008310.1	beta_vulgaris	BEvul09G0008310.1
BpenContig1230030820.1	betula_pendula	BpenContig1230030820.1
BpenContig17590084280.1	betula_pendula	BpenContig17590084280.1
BpenContig520207450.1	betula_pendula	BpenContig520207450.1
BpenContig53680213330.1	betula_pendula	BpenContig53680213330.1
BpenContig9570277060.1	betula_pendula	BpenContig9570277060.1
Bpusscaffold_30055420	blasia_pusilla	Bpusscaffold_30055420
Bpusscaffold_30060210	blasia_pusilla	Bpusscaffold_30060210
Bpusscaffold_40106270	blasia_pusilla	Bpusscaffold_40106270
Bpusscaffold_60132180	blasia_pusilla	Bpusscaffold_60132180
Bpusscaffold_80173180	blasia_pusilla	Bpusscaffold_80173180
Boea_hygrometrica_lcl\|KQ990066.1_cds_KZV53803.1_5011	boea_hygrometrica	Boea_hygrometrica_lcl\|KQ990066.1_cds_KZV53803.1_5011
Boea_hygrometrica_lcl\|KV006349.1_cds_KZV32808.1_26060	boea_hygrometrica	Boea_hygrometrica_lcl\|KV006349.1_cds_KZV32808.1_26060
Boea_hygrometrica_lcl\|KV006980.1_cds_KZV31973.1_26863	boea_hygrometrica	Boea_hygrometrica_lcl\|KV006980.1_cds_KZV31973.1_26863
BOERETT00002367	boechera_retrofracta	BOERETT00002367
BOERETT00019164	boechera_retrofracta	BOERETT00019164
BOERETT00028174	boechera_retrofracta	BOERETT00028174
BOERETT00036520	boechera_retrofracta	BOERETT00036520
BOERETT00049424	boechera_retrofracta	BOERETT00049424
BOERETT00061577	boechera_retrofracta	BOERETT00061577
BceiScaffold1360080260	bombax_ceiba	BceiScaffold1360080260