TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
BceiScaffold3140288830	bombax_ceiba	BceiScaffold3140288830
BceiScaffold480382750	bombax_ceiba	BceiScaffold480382750
BceiScaffold480384050	bombax_ceiba	BceiScaffold480384050
BceiScaffold50397550	bombax_ceiba	BceiScaffold50397550
BceiScaffold570420330	bombax_ceiba	BceiScaffold570420330
BceiScaffold590428140	bombax_ceiba	BceiScaffold590428140
BOampscaffold17830134350	bonia_amplexicaulis	BOampscaffold17830134350
BOampscaffold1980148530	bonia_amplexicaulis	BOampscaffold1980148530
BOampscaffold2030157190	bonia_amplexicaulis	BOampscaffold2030157190
BOampscaffold23860194380	bonia_amplexicaulis	BOampscaffold23860194380
BOampscaffold450323020	bonia_amplexicaulis	BOampscaffold450323020
BOampscaffold50920366250	bonia_amplexicaulis	BOampscaffold50920366250
BOampscaffold5610380000	bonia_amplexicaulis	BOampscaffold5610380000
BOampscaffold9160454360	bonia_amplexicaulis	BOampscaffold9160454360
BOampscaffold930459370	bonia_amplexicaulis	BOampscaffold930459370
bothriochloa_decipiens_Bdec01896-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec01896-RA
bothriochloa_decipiens_Bdec05087-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec05087-RA
bothriochloa_decipiens_Bdec07344-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec07344-RA
bothriochloa_decipiens_Bdec11653-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec11653-RA
bothriochloa_decipiens_Bdec19958-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec19958-RA
bothriochloa_decipiens_Bdec22088-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec22088-RA
bothriochloa_decipiens_Bdec23455-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec23455-RA
bothriochloa_decipiens_Bdec29063-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec29063-RA
bothriochloa_decipiens_Bdec40357-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec40357-RA
bothriochloa_decipiens_Bdec40363-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec40363-RA
bothriochloa_decipiens_Bdec44976-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec44976-RA
bothriochloa_decipiens_Bdec45751-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec45751-RA
bothriochloa_decipiens_Bdec45763-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec45763-RA
Bbrascaffold_101_20002670.1	botryococcus_braunii	Bbrascaffold_101_20002670.1
Bbrascaffold_2040083500.1	botryococcus_braunii	Bbrascaffold_2040083500.1