TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
camellia_oleifera_genemark-HiC_scaffold_15-processed-gene-1343.41-mRNA-1	camellia_oleifera	camellia_oleifera_genemark-HiC_scaffold_15-processed-gene-1343.41-mRNA-1
camellia_oleifera_maker-HiC_scaffold_15-snap-gene-1342.45-mRNA-1	camellia_oleifera	camellia_oleifera_maker-HiC_scaffold_15-snap-gene-1342.45-mRNA-1
camellia_sinensis_GWHPASIV002080	camellia_sinensis	camellia_sinensis_GWHPASIV002080
camellia_sinensis_GWHPASIV018308	camellia_sinensis	camellia_sinensis_GWHPASIV018308
camellia_sinensis_GWHPASIV036299	camellia_sinensis	camellia_sinensis_GWHPASIV036299
camellia_sinensis_GWHPASIV036300	camellia_sinensis	camellia_sinensis_GWHPASIV036300
Cacu04G0010840.1	camptotheca_acuminata	Cacu04G0010840.1
Cacu04G0010840.2	camptotheca_acuminata	Cacu04G0010840.2
Cacu04G0010840.3	camptotheca_acuminata	Cacu04G0010840.3
Cacu04G0010840.4	camptotheca_acuminata	Cacu04G0010840.4
Cacu04G0010840.6	camptotheca_acuminata	Cacu04G0010840.6
Cacu05G0008040.1	camptotheca_acuminata	Cacu05G0008040.1
Cacu07G0006080.1	camptotheca_acuminata	Cacu07G0006080.1
Cacu07G0006080.2	camptotheca_acuminata	Cacu07G0006080.2
Cacu21G0001720.1	camptotheca_acuminata	Cacu21G0001720.1
Cacu21G0001730.1	camptotheca_acuminata	Cacu21G0001730.1
Cacu21G0001730.2	camptotheca_acuminata	Cacu21G0001730.2
Cacu21G0001730.3	camptotheca_acuminata	Cacu21G0001730.3
Cacu21G0008600.1	camptotheca_acuminata	Cacu21G0008600.1
Cacu21G0008600.2	camptotheca_acuminata	Cacu21G0008600.2
capparis_spinosa_Cs02G000950.1	capparis_spinosa	capparis_spinosa_Cs02G000950.1
capparis_spinosa_Cs02G002410.1	capparis_spinosa	capparis_spinosa_Cs02G002410.1
capparis_spinosa_Cs12G010050.1	capparis_spinosa	capparis_spinosa_Cs12G010050.1
CAgraScaffold13780032720.1	capsella_grandiflora	CAgraScaffold13780032720.1
CAgraScaffold2390098230.1	capsella_grandiflora	CAgraScaffold2390098230.1
CAgraScaffold30860124080.1	capsella_grandiflora	CAgraScaffold30860124080.1
CAgraScaffold38340145490.1	capsella_grandiflora	CAgraScaffold38340145490.1
CAgraScaffold61700196080.1	capsella_grandiflora	CAgraScaffold61700196080.1
CAgraScaffold61700196080.2	capsella_grandiflora	CAgraScaffold61700196080.2
CAgraScaffold9170237910.1	capsella_grandiflora	CAgraScaffold9170237910.1