PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Crubscaffold_20058480.1 capsella_rubella Crubscaffold_20058480.1
Crubscaffold_30092880.1 capsella_rubella Crubscaffold_30092880.1
Crubscaffold_40138720.1 capsella_rubella Crubscaffold_40138720.1
Crubscaffold_50143420.1 capsella_rubella Crubscaffold_50143420.1
Crubscaffold_60188270.1 capsella_rubella Crubscaffold_60188270.1
Crubscaffold_80274660.1 capsella_rubella Crubscaffold_80274660.1
Cann02G0015000.1 capsicum_annuum Cann02G0015000.1
Cann02G0024850.1 capsicum_annuum Cann02G0024850.1
Cann03G0027110.1 capsicum_annuum Cann03G0027110.1
Cann05G0017940.1 capsicum_annuum Cann05G0017940.1
Cann08G0000890.1 capsicum_annuum Cann08G0000890.1
Cann11G0011560.1 capsicum_annuum Cann11G0011560.1
Cann12G0003000.1 capsicum_annuum Cann12G0003000.1
CbacCBv1.2.scaffold1340058480.1 capsicum_baccatum CbacCBv1.2.scaffold1340058480.1
CbacCBv1.2.scaffold15050082650.1 capsicum_baccatum CbacCBv1.2.scaffold15050082650.1
CbacCBv1.2.scaffold2010138340.1 capsicum_baccatum CbacCBv1.2.scaffold2010138340.1
CbacCBv1.2.scaffold2150149290.1 capsicum_baccatum CbacCBv1.2.scaffold2150149290.1
CbacCBv1.2.scaffold3580211280.1 capsicum_baccatum CbacCBv1.2.scaffold3580211280.1
CbacCBv1.2.scaffold70300900.1 capsicum_baccatum CbacCBv1.2.scaffold70300900.1
CbacCBv1.2.scaffold8930339160.1 capsicum_baccatum CbacCBv1.2.scaffold8930339160.1
CAchiCCv1.2.scaffold3480161580.1 capsicum_chinense CAchiCCv1.2.scaffold3480161580.1
CAchiCCv1.2.scaffold4050185820.1 capsicum_chinense CAchiCCv1.2.scaffold4050185820.1
CAchiCCv1.2.scaffold7340293410.1 capsicum_chinense CAchiCCv1.2.scaffold7340293410.1
CAchiCCv1.2.scaffold8500320710.1 capsicum_chinense CAchiCCv1.2.scaffold8500320710.1
CAchiCCv1.2.scaffold8910330120.1 capsicum_chinense CAchiCCv1.2.scaffold8910330120.1
CAchiCCv1.2.scaffold9270339120.1 capsicum_chinense CAchiCCv1.2.scaffold9270339120.1
CAchiCCv1.2.scaffold9370340960.1 capsicum_chinense CAchiCCv1.2.scaffold9370340960.1
cardamine_enshiensis_GWHPBHEU003879 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU003879
cardamine_enshiensis_GWHPBHEU006513 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU006513
cardamine_enshiensis_GWHPBHEU010194 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU010194