PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
cenchrus_fungigraminus_GWHPBWDX028725.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX028725.1
cenchrus_fungigraminus_GWHPBWDX039900.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX039900.1
cenchrus_fungigraminus_GWHPBWDX039917.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX039917.1
cenchrus_fungigraminus_GWHPBWDX040935.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX040935.1
cenchrus_fungigraminus_GWHPBWDX043193.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX043193.1
cenchrus_fungigraminus_GWHPBWDX045367.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX045367.1
cenchrus_fungigraminus_GWHPBWDX046726.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX046726.1
cenchrus_fungigraminus_GWHPBWDX049997.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX049997.1
cenchrus_fungigraminus_GWHPBWDX054901.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX054901.1
cenchrus_fungigraminus_GWHPBWDX062022.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX062022.1
cenchrus_fungigraminus_GWHPBWDX071121.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX071121.1
PenpuA10018956.g cenchrus_purpureus PenpuA10018956.g
PenpuA20042723.g cenchrus_purpureus PenpuA20042723.g
PenpuA30055250.g cenchrus_purpureus PenpuA30055250.g
PenpuA30056851.g cenchrus_purpureus PenpuA30056851.g
PenpuA30056860.g cenchrus_purpureus PenpuA30056860.g
PenpuA30058553.g cenchrus_purpureus PenpuA30058553.g
PenpuA50059651.g cenchrus_purpureus PenpuA50059651.g
PenpuA60068425.g cenchrus_purpureus PenpuA60068425.g
PenpuB10011299.g cenchrus_purpureus PenpuB10011299.g
PenpuB20052036.g cenchrus_purpureus PenpuB20052036.g
PenpuB30075713.g cenchrus_purpureus PenpuB30075713.g
PenpuB30075730.g cenchrus_purpureus PenpuB30075730.g
PenpuB50031022.g cenchrus_purpureus PenpuB50031022.g
centella_asiatica_evm.model.Scaffold_1.1798 centella_asiatica centella_asiatica_evm.model.Scaffold_1.1798
centella_asiatica_evm.model.Scaffold_1.4231 centella_asiatica centella_asiatica_evm.model.Scaffold_1.4231
centella_asiatica_evm.model.Scaffold_1.4517 centella_asiatica centella_asiatica_evm.model.Scaffold_1.4517
centella_asiatica_evm.model.Scaffold_2.56 centella_asiatica centella_asiatica_evm.model.Scaffold_2.56
centella_asiatica_evm.model.Scaffold_2.693 centella_asiatica centella_asiatica_evm.model.Scaffold_2.693
centella_asiatica_evm.model.Scaffold_5.2008 centella_asiatica centella_asiatica_evm.model.Scaffold_5.2008