PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Cglascaffold1690057360 casuarina_glauca Cglascaffold1690057360
Cglascaffold4790185700 casuarina_glauca Cglascaffold4790185700
Cglascaffold720229270 casuarina_glauca Cglascaffold720229270
Cnit1729650019000 catagonium_nitens Cnit1729650019000
Cnit2404140089490 catagonium_nitens Cnit2404140089490
Cnit2446020109830 catagonium_nitens Cnit2446020109830
Cnit2540490150160 catagonium_nitens Cnit2540490150160
Cnit2612460234190 catagonium_nitens Cnit2612460234190
catharanthus_roseus_CRO_T001113 catharanthus_roseus catharanthus_roseus_CRO_T001113
catharanthus_roseus_CRO_T018917 catharanthus_roseus catharanthus_roseus_CRO_T018917
catharanthus_roseus_CRO_T022447 catharanthus_roseus catharanthus_roseus_CRO_T022447
catharanthus_roseus_CRO_T022448 catharanthus_roseus catharanthus_roseus_CRO_T022448
catharanthus_roseus_CRO_T024951 catharanthus_roseus catharanthus_roseus_CRO_T024951
catharanthus_roseus_CRO_T025577 catharanthus_roseus catharanthus_roseus_CRO_T025577
Clenscf_210046110.1 caulerpa_lentillifera Clenscf_210046110.1
CEame01G0015060 cenchrus_americanus CEame01G0015060
CEame02G0008000 cenchrus_americanus CEame02G0008000
CEame03G0039370 cenchrus_americanus CEame03G0039370
CEame03G0041310 cenchrus_americanus CEame03G0041310
CEame03G0051450 cenchrus_americanus CEame03G0051450
CEame05G0013380 cenchrus_americanus CEame05G0013380
CEame05G0035570 cenchrus_americanus CEame05G0035570
CEame06G0040830 cenchrus_americanus CEame06G0040830
cenchrus_fungigraminus_GWHPBWDX002135.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX002135.1
cenchrus_fungigraminus_GWHPBWDX009337.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX009337.1
cenchrus_fungigraminus_GWHPBWDX010569.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX010569.1
cenchrus_fungigraminus_GWHPBWDX014541.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX014541.1
cenchrus_fungigraminus_GWHPBWDX020482.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX020482.1
cenchrus_fungigraminus_GWHPBWDX027733.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX027733.1
cenchrus_fungigraminus_GWHPBWDX027749.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX027749.1