PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
carya_illinoinensis_Caril.07G038400.1.p carya_illinoinensis carya_illinoinensis_Caril.07G038400.1.p
carya_illinoinensis_Caril.15G132500.1.p carya_illinoinensis carya_illinoinensis_Caril.15G132500.1.p
carya_illinoinensis_Caril.16G101200.1.p carya_illinoinensis carya_illinoinensis_Caril.16G101200.1.p
castanea_dentata_Caden.01G233100.1.p castanea_dentata castanea_dentata_Caden.01G233100.1.p
castanea_dentata_Caden.02G170100.1.p castanea_dentata castanea_dentata_Caden.02G170100.1.p
castanea_dentata_Caden.03G125100.1.p castanea_dentata castanea_dentata_Caden.03G125100.1.p
castanea_dentata_Caden.03G125200.1.p castanea_dentata castanea_dentata_Caden.03G125200.1.p
castanea_dentata_Caden.03G125300.1.p castanea_dentata castanea_dentata_Caden.03G125300.1.p
castanea_dentata_Caden.03G156600.1.p castanea_dentata castanea_dentata_Caden.03G156600.1.p
castanea_dentata_Caden.04G086500.1.p castanea_dentata castanea_dentata_Caden.04G086500.1.p
Cmolctg00060013450.1 castanea_mollissima Cmolctg00060013450.1
Cmolctg01160113910.1 castanea_mollissima Cmolctg01160113910.1
Cmolctg01360126010.1 castanea_mollissima Cmolctg01360126010.1
Cmolctg03260208520.1 castanea_mollissima Cmolctg03260208520.1
Cmolctg10690321980.1 castanea_mollissima Cmolctg10690321980.1
castanopsis_hystrix_GWHPBWDD000029 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD000029
castanopsis_hystrix_GWHPBWDD004874 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD004874
castanopsis_hystrix_GWHPBWDD004876 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD004876
castanopsis_hystrix_GWHPBWDD004879 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD004879
castanopsis_hystrix_GWHPBWDD020286 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD020286
castanopsis_hystrix_GWHPBWDD025691 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD025691
castanopsis_hystrix_GWHPBWDD026168 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD026168
castanopsis_hystrix_GWHPBWDD029991 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD029991
casuarina_equisetifolia_CCG004037 casuarina_equisetifolia casuarina_equisetifolia_CCG004037
casuarina_equisetifolia_CCG004038 casuarina_equisetifolia casuarina_equisetifolia_CCG004038
casuarina_equisetifolia_CCG021293 casuarina_equisetifolia casuarina_equisetifolia_CCG021293
casuarina_equisetifolia_CCG025919 casuarina_equisetifolia casuarina_equisetifolia_CCG025919
casuarina_equisetifolia_CCG029628 casuarina_equisetifolia casuarina_equisetifolia_CCG029628
Cglascaffold130025900 casuarina_glauca Cglascaffold130025900
Cglascaffold1350032490 casuarina_glauca Cglascaffold1350032490