TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Cariscaffold10060000200.1	cicer_arietinum	Cariscaffold10060000200.1
Cr_07038.1\|Cr_LG_3:29744535-29747168\|minus\|	cicer_reticulatum	Cr_07038.1\|Cr_LG_3:29744535-29747168\|minus\|
Cr_09249.1\|Cr_LG_4:19895636-19897253\|minus\|	cicer_reticulatum	Cr_09249.1\|Cr_LG_4:19895636-19897253\|minus\|
Cr_14451.1\|Cr_LG_6:3819663-3827331\|plus\|	cicer_reticulatum	Cr_14451.1\|Cr_LG_6:3819663-3827331\|plus\|
Cr_15979.1\|Cr_LG_6:22882220-22884503\|plus\|	cicer_reticulatum	Cr_15979.1\|Cr_LG_6:22882220-22884503\|plus\|
Cr_21409.1\|Cr_LG_8:10266974-10272417\|plus\|	cicer_reticulatum	Cr_21409.1\|Cr_LG_8:10266974-10272417\|plus\|
Cr_21710.1\|Cr_LG_8:14245719-14247614\|plus\|	cicer_reticulatum	Cr_21710.1\|Cr_LG_8:14245719-14247614\|plus\|
Cr_23451.1\|scaffold1609:16438-24041\|plus\|	cicer_reticulatum	Cr_23451.1\|scaffold1609:16438-24041\|plus\|
cinchona_pubescens_g13378.t1	cinchona_pubescens	cinchona_pubescens_g13378.t1
cinchona_pubescens_g207.t1	cinchona_pubescens	cinchona_pubescens_g207.t1
cinchona_pubescens_g22100.t1	cinchona_pubescens	cinchona_pubescens_g22100.t1
cinchona_pubescens_g41465.t1	cinchona_pubescens	cinchona_pubescens_g41465.t1
cinchona_pubescens_g6104.t1	cinchona_pubescens	cinchona_pubescens_g6104.t1
cinnamomum_camphora_GWHPBGXC000060	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC000060
cinnamomum_camphora_GWHPBGXC000062	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC000062
cinnamomum_camphora_GWHPBGXC006667	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC006667
cinnamomum_camphora_GWHPBGXC018825	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC018825
cinnamomum_camphora_GWHPBGXC022318	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC022318
cinnamomum_camphora_GWHPBGXC023486	cinnamomum_camphora	cinnamomum_camphora_GWHPBGXC023486
CkanCKAN.scaff00010035120.1	cinnamomum_kanehirae	CkanCKAN.scaff00010035120.1
CkanCKAN.scaff00010035140.1	cinnamomum_kanehirae	CkanCKAN.scaff00010035140.1
CkanCKAN.scaff00050140390.1	cinnamomum_kanehirae	CkanCKAN.scaff00050140390.1
CkanCKAN.scaff00050140400.1	cinnamomum_kanehirae	CkanCKAN.scaff00050140400.1
CkanCKAN.scaff00110252960.1	cinnamomum_kanehirae	CkanCKAN.scaff00110252960.1
cissus_rotundifolia_CRGY0204969.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0204969.1
cissus_rotundifolia_CRGY0207680.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0207680.1
cissus_rotundifolia_CRGY0207681.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0207681.1
cissus_rotundifolia_CRGY0223466.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0223466.1
cissus_rotundifolia_CRGY0224445.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0224445.1
citrullus_lanatus_ClG42_01g0069300.10	citrullus_lanatus	citrullus_lanatus_ClG42_01g0069300.10