PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
coix_lacryma-jobi_GWHPAAYR052666 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR052666
coix_lacryma-jobi_GWHPAAYR052667 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR052667
coix_lacryma-jobi_GWHPAAYR062782 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR062782
coix_lacryma-jobi_GWHPAAYR062783 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR062783
coix_lacryma-jobi_GWHPAAYR064495 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR064495
coix_lacryma-jobi_GWHPAAYR064507 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR064507
colocasia_esculenta_EVM0004377.1 colocasia_esculenta colocasia_esculenta_EVM0004377.1
colocasia_esculenta_EVM0005879.1 colocasia_esculenta colocasia_esculenta_EVM0005879.1
colocasia_esculenta_EVM0008314.1 colocasia_esculenta colocasia_esculenta_EVM0008314.1
colocasia_esculenta_EVM0017789.1 colocasia_esculenta colocasia_esculenta_EVM0017789.1
colocasia_esculenta_EVM0018147.1 colocasia_esculenta colocasia_esculenta_EVM0018147.1
colocasia_esculenta_EVM0021559.1 colocasia_esculenta colocasia_esculenta_EVM0021559.1
Cconscaffold_40090820 conocephalum_conicum Cconscaffold_40090820
Cconscaffold_60139130 conocephalum_conicum Cconscaffold_60139130
Ccapcontig136660225680.1 corchorus_capsularis Ccapcontig136660225680.1
Ccapcontig145310251170.1 corchorus_capsularis Ccapcontig145310251170.1
COsat01G0024570.1 coriandrum_sativum COsat01G0024570.1
COsat04G0013860.1 coriandrum_sativum COsat04G0013860.1
COsat05G0022470.1 coriandrum_sativum COsat05G0022470.1
COsat06G0008570.1 coriandrum_sativum COsat06G0008570.1
COsat09G0020980.1 coriandrum_sativum COsat09G0020980.1
COsatctg59390042420.1 coriandrum_sativum COsatctg59390042420.1
coriaria_nepalensis_Conep11aG0024900.1 coriaria_nepalensis coriaria_nepalensis_Conep11aG0024900.1
coriaria_nepalensis_Conep11bG0025200.1 coriaria_nepalensis coriaria_nepalensis_Conep11bG0025200.1
coriaria_nepalensis_Conep13aG0037200.1 coriaria_nepalensis coriaria_nepalensis_Conep13aG0037200.1
coriaria_nepalensis_Conep13bG0036500.1 coriaria_nepalensis coriaria_nepalensis_Conep13bG0036500.1
coriaria_nepalensis_Conep18aG0128500.1 coriaria_nepalensis coriaria_nepalensis_Conep18aG0128500.1
coriaria_nepalensis_Conep18bG0127800.1 coriaria_nepalensis coriaria_nepalensis_Conep18bG0127800.1
coriaria_nepalensis_Conep19aG0038100.1 coriaria_nepalensis coriaria_nepalensis_Conep19aG0038100.1
coriaria_nepalensis_Conep19bG0037700.1 coriaria_nepalensis coriaria_nepalensis_Conep19bG0037700.1