TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
CsonA9G0001240.1	cleistogenes_songorica	CsonA9G0001240.1
CsonB2G0007830.1	cleistogenes_songorica	CsonB2G0007830.1
CsonB2G0016050.1	cleistogenes_songorica	CsonB2G0016050.1
CsonB2G0016070.1	cleistogenes_songorica	CsonB2G0016070.1
CsonB4G0009440.1	cleistogenes_songorica	CsonB4G0009440.1
CsonB4G0026980.1	cleistogenes_songorica	CsonB4G0026980.1
CsonB6G0006300.1	cleistogenes_songorica	CsonB6G0006300.1
Carb1194860014850.1	clethra_arborea	Carb1194860014850.1
Carb1194870014890.1	clethra_arborea	Carb1194870014890.1
Carb967820171130.1	clethra_arborea	Carb967820171130.1
CLame476760001410	climacium_americanum	CLame476760001410
CLame659530071770	climacium_americanum	CLame659530071770
CLame662210098080	climacium_americanum	CLame662210098080
CLame663280110760	climacium_americanum	CLame663280110760
Cnucscaffold191910083900	cocos_nucifera	Cnucscaffold191910083900
Cnucscaffold31840143290	cocos_nucifera	Cnucscaffold31840143290
Cnucscaffold4400184490	cocos_nucifera	Cnucscaffold4400184490
Cnucscaffold6830235170	cocos_nucifera	Cnucscaffold6830235170
Cnucscaffold79100254750	cocos_nucifera	Cnucscaffold79100254750
codonopsis_lanceolata_Cl_chr01_19020T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr01_19020T
codonopsis_lanceolata_Cl_chr01_19140T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr01_19140T
codonopsis_lanceolata_Cl_chr01_24670T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr01_24670T
Ccane04G0009100.1	coffea_canephora	Ccane04G0009100.1
Ccane07G0007590.1	coffea_canephora	Ccane07G0007590.1
Ccane07G0012910.1	coffea_canephora	Ccane07G0012910.1
Ccane11G0005190.1	coffea_canephora	Ccane11G0005190.1
Ccane11G0005210.1	coffea_canephora	Ccane11G0005210.1
coix_lacryma-jobi_GWHPAAYR014093	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014093
coix_lacryma-jobi_GWHPAAYR020716	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR020716
coix_lacryma-jobi_GWHPAAYR033799	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR033799